RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 ASIC2Q16515 512 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 ZCWPW2Q504Y3 356 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 KCTD16Q68DU8 428 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 CCDC170Q8IYT3 715 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 RTKN2Q8IZC4 609 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 WNK4Q96J92 1243 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 CAMKK2Q96RR4 588 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 NAP1L4Q99733 375 aaKnown RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 KIFC3Q9BVG8 833 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 USP20Q9Y2K6 914 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 PCDHA2Q9Y5H9 948 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 CAPN7Q9Y6W3 813 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 EPB41P11171 864 aaKnown RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 FECHP22830 423 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 KLRC1P26715 233 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 GGCXP38435 758 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 AMPD2Q01433 879 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 SPDYE2Q495Y8 402 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 TRAPPC11Q7Z392 1133 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 TRIM59Q8IWR1 403 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 UBXN6Q9BZV1 441 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 SLC24A3Q9HC58 644 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 MYOZ2Q9NPC6 264 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 MRPL11Q9Y3B7 192 aaKnown RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 IGLV3-22A0A075B6J6 115 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 RBAK-RBAKDNI3L0D1 243 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 MAP2K7O14733 419 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 PALMO75781 387 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 SETQ01105 290 aaPredicted RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 CIAPIN1Q6FI81 312 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 MIER3Q7Z3K6 550 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 ZNF513Q8N8E2 541 aaPredicted RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 ALS2CR12Q96Q35 445 aa11.03□□□□□ -0.64
FOXN4-201ENST00000299162 AJAP1Q9UKB5 411 aaPredicted RBP11.03□□□□□ -0.64
FOXN4-201ENST00000299162 K7ENM7 598 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 EXOC3O60645 756 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 VIL1P09327 827 aaKnown RBP11.02□□□□□ -0.64
FOXN4-201ENST00000299162 ITGB5P18084 799 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 NPEPPSP55786 919 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 PTK2Q05397 1052 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.64
FOXN4-201ENST00000299162 NBPF12Q5TAG4 269 aaPredicted RBP11.02□□□□□ -0.64
FOXN4-201ENST00000299162 PLA2G4FQ68DD2 849 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 ADAT2Q7Z6V5 191 aaKnown RBP11.02□□□□□ -0.64
FOXN4-201ENST00000299162 FAM71BQ8TC56 605 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 SH2D4AQ9H788 454 aa11.02□□□□□ -0.64
FOXN4-201ENST00000299162 CYP3A7-CYP3A51PA0A087WV96 503 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 AFPP02771 609 aaKnown RBP11.02□□□□□ -0.65
FOXN4-201ENST00000299162 MYBL2P10244 700 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 CYP3A7P24462 503 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 Q4G0T1 1027 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 NAIF1Q69YI7 327 aaPredicted RBP11.02□□□□□ -0.65
FOXN4-201ENST00000299162 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 CEP57Q86XR8 500 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 ZSWIM2Q8NEG5 633 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 TAAR1Q96RJ0 339 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 PARVGQ9HBI0 331 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 KCNH7Q9NS40 1196 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 FAM169AQ9Y6X4 670 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 GOLGA6CA6NDK9 693 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 MYO1FO00160 1098 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 CALUO43852 315 aaPredicted RBP11.02□□□□□ -0.65
FOXN4-201ENST00000299162 PPFIA4O75335 1185 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 ASNSP08243 561 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 GOLGA6DP0CG33 693 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 PRELPP51888 382 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 FAM186BQ8IYM0 893 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 IFT81Q8WYA0 676 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 KAT2BQ92831 832 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 GOLGA6AQ9NYA3 693 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.65
FOXN4-201ENST00000299162 ZSCAN5CA6NGD5 496 aaPredicted RBP11.01□□□□□ -0.65
FOXN4-201ENST00000299162 CCDC169A6NNP5 214 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 HIP1RO75146 1068 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 EYA4O95677 639 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 UCHL3P15374 230 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 GNGT1P63211 74 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 HGSNATQ68CP4 663 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 KLHL7Q8IXQ5 586 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 MICALL2Q8IY33 904 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 FAM76AQ8TAV0 307 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 U2AF1L4Q8WU68 220 aaKnown RBP11.01□□□□□ -0.65
FOXN4-201ENST00000299162 CCDC127Q96BQ5 260 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 NOX5Q96PH1 765 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 LRRC1Q9BTT6 524 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 MRIQ9BWK5 157 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 TEKT3Q9BXF9 490 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 TAOK3Q9H2K8 898 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 CEP72Q9P209 647 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 RGS17Q9UGC6 210 aaPredicted RBP11.01□□□□□ -0.65
FOXN4-201ENST00000299162 KCNA3P22001 575 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 HS2ST1Q7LGA3 356 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 SUGP1Q8IWZ8 645 aaKnown RBP11.01□□□□□ -0.65
FOXN4-201ENST00000299162 KIRREL3Q8IZU9 778 aa11.01□□□□□ -0.65
FOXN4-201ENST00000299162 CRYGNQ8WXF5 182 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms