RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 SYDE2Q5VT97 1194 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 FAM186BQ8IYM0 893 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 DCAF4Q8WV16 495 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 PKD2L1Q9P0L9 805 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 FBXL5Q9UKA1 691 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 PPP1R9AQ9ULJ8 1098 aa26.58■■□□□ 1.84
SPTSSA-201ENST00000298130 A0A087WUV0 522 aaPredicted RBP26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 TMOD1P28289 359 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 JAM2P57087 298 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 Q4G0T1 1027 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 HHIPL2Q6UWX4 724 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 WDR18Q9BV38 432 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 DCDC2CA8MYV0 355 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 ERLIN2O94905 339 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 SREBF1P36956 1147 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 ECE1P42892 770 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 TBC1D10BQ4KMP7 808 aaPredicted RBP26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 AADACL2Q6P093 401 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 CCDC174Q6PII3 467 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 KDM7AQ6ZMT4 941 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 BANK1Q8NDB2 785 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 TDRD3Q9H7E2 651 aaKnown RBP26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 PI4KBQ9UBF8 816 aa26.57■■□□□ 1.84
SPTSSA-201ENST00000298130 BUB1BO60566 1050 aaPredicted RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 TOM1O60784 492 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 FGGP02679 453 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 ZBTB48P10074 688 aaPredicted RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 SF3A3Q12874 501 aaKnown RBP eCLIP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 DRAP1Q14919 205 aaPredicted RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 ABCB5Q2M3G0 1257 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 SEPT12Q8IYM1 358 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 ZNF622Q969S3 477 aaKnown RBP eCLIP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 NYAP2Q9P242 653 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 WRAP73Q9P2S5 460 aaPredicted RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 RPL13P26373 211 aaKnown RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 HSPA9P38646 679 aaKnown RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 HDLBPQ00341 1268 aaKnown RBP26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 NT5DC3Q86UY8 548 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 MKL1Q969V6 931 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 SH2D3AQ9BRG2 576 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 DNAJC12Q9UKB3 198 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 ZMYM2Q9UBW7 1377 aa26.56■■□□□ 1.84
SPTSSA-201ENST00000298130 DDX39AO00148 427 aaKnown RBP26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 MREGQ8N565 214 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 SLC35G2Q8TBE7 412 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 ARHGEF26Q96DR7 871 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 PBKQ96KB5 322 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 BZW2Q9Y6E2 419 aaKnown RBP26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 TISP43B9A030 160 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 E7EVH7 732 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 SLITRK3O94933 977 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 ITGB3BPQ13352 177 aaPredicted RBP26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 ZYXQ15942 572 aaKnown RBP26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 ACTRT1Q8TDG2 376 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 GLT8D2Q9H1C3 349 aa26.55■■□□□ 1.84
SPTSSA-201ENST00000298130 UBAP1LF5GYI3 381 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 TRIM37O94972 964 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 HOXA7P31268 230 aaPredicted RBP26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 PRKCIP41743 596 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 PLCD3Q8N3E9 789 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 GJD4Q96KN9 370 aaPredicted RBP26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 SUGT1Q9Y2Z0 365 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 FOCADQ5VW36 1801 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 PPP1R37O75864 691 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 EYA4O95677 639 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 STAT1P42224 750 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 KIAA1755Q5JYT7 1200 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 VPS36Q86VN1 386 aa26.54■■□□□ 1.84
SPTSSA-201ENST00000298130 BMP3P12645 472 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 INPP5BP32019 993 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 ZNF844Q08AG5 666 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 TMBIM4Q9HC24 238 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 MDH1P40925 334 aaKnown RBP26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 PTGISQ16647 500 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 ODF2Q5BJF6 829 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 C10orf76Q5T2E6 689 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 MSL1Q68DK7 614 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 CHADLQ6NUI6 762 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 OLIG1Q8TAK6 271 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 FAM20AQ96MK3 541 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 METTL14Q9HCE5 456 aaKnown RBP26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 TMOD4Q9NZQ9 345 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 PRR12Q9ULL5 1215 aa26.53■■□□□ 1.84
SPTSSA-201ENST00000298130 GOLGA6L10A6NI86 522 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 F8VZ95 297 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 GCOM1H8Y6P7 765 aaPredicted RBP26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 MYZAPP0CAP1 466 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 LLGL1Q15334 1064 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 IFI16Q16666 785 aaKnown RBP26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 DCAF12L1Q5VU92 463 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 LRCH2Q5VUJ6 765 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 ZNF473Q8WTR7 871 aaKnown RBP26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 BORCS6Q96GS4 357 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 CCT8L2Q96SF2 557 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 EPN3Q9H201 632 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 PCIF1Q9H4Z3 704 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 STXBP5LQ9Y2K9 1186 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 BTNL10A8MVZ5 291 aa26.52■■□□□ 1.84
SPTSSA-201ENST00000298130 H0YGN5 161 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms