RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 ARMCX3Q9UH62 379 aaPredicted RBP14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 UBE4BO95155 1302 aa14.94□□□□□ -0.02
CHMP4C-201ENST00000297265 LRRC53A6NM62 1247 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 SLC16A3O15427 465 aaKnown RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ATG7O95352 703 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 PLS3P13797 630 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 RPL13P26373 211 aaKnown RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 GNG11P61952 73 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 NAA30Q147X3 362 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 STXBP2Q15833 593 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 EAPPQ56P03 285 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 SWSAP1Q6NVH7 229 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 CDHR1Q96JP9 859 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 EDEM3Q9BZQ6 932 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 JPH1Q9HDC5 661 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 AGPAT3Q9NRZ7 376 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 LARSQ9P2J5 1176 aaKnown RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 GABBR1Q9UBS5 961 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 SLC9A2Q9UBY0 812 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 FBXO40Q9UH90 709 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ZC3H4Q9UPT8 1303 aaKnown RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ARID2Q68CP9 1835 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 TLR2O60603 784 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ATP4AP20648 1035 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ACTR2P61160 394 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 IRX3P78415 501 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 TTLL12Q14166 644 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 XKR9Q5GH70 373 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 HGSNATQ68CP4 663 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF710Q8N1W2 664 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF397Q8NF99 534 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 TMEM174Q8WUU8 243 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 FGD4Q96M96 766 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 GBP3Q9H0R5 595 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 GANQ9H2C0 597 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF215Q9UL58 517 aaPredicted RBP14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 TFR2Q9UP52 801 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 PFASO15067 1338 aa14.93□□□□□ -0.02
CHMP4C-201ENST00000297265 RCCD1A6NED2 376 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 GTF2BQ00403 316 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 TSR1Q2NL82 804 aaKnown RBP14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 ASTE1Q2TB18 679 aaPredicted RBP14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 PDXDC1Q6P996 788 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 RRAGAQ7L523 313 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 SLC9A9Q8IVB4 645 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 CCDC170Q8IYT3 715 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 LRRN4CLQ8ND94 238 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 NEK11Q8NG66 645 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 PAGR1Q9BTK6 254 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 METTL14Q9HCE5 456 aaKnown RBP14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 LRRC37A2A6NM11 1700 aa14.92□□□□□ -0.02
CHMP4C-201ENST00000297265 EIF3CLB5ME19 914 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 TISP43B9A030 160 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 SORBS3O60504 671 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 XRCC5P13010 732 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 SLC9A1P19634 815 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 NCKAP1LP55160 1127 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 GPR162Q16538 588 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 GNPTABQ3T906 1256 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNF662Q6ZS27 426 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 CYFIP1Q7L576 1253 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 SYNGAP1Q96PV0 1343 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 EIF3CQ99613 913 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 MKNK1Q9BUB5 465 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 TIPINQ9BVW5 301 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 LSM14BQ9BX40 385 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 CEP72Q9P209 647 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 TRIM10Q9UDY6 481 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 MYH9P35579 1960 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 K7ENM7 598 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 AFPP02771 609 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 PSAPP07602 524 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 ACTN1P12814 892 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 PON1P27169 355 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 PSMC2P35998 433 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 SOX10P56693 466 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 PPP2R3AQ06190 1150 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 ARMC9Q7Z3E5 817 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 HAUS6Q7Z4H7 955 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 BSNDQ8WZ55 320 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 NTPCRQ9BSD7 190 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 LACRTQ9GZZ8 138 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 NLRC4Q9NPP4 1024 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 XPNPEP1Q9NQW7 623 aa14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNHIT6Q9NWK9 470 aaKnown RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 MAFBQ9Y5Q3 323 aaPredicted RBP14.91□□□□□ -0.02
CHMP4C-201ENST00000297265 IGSF9BQ9UPX0 1349 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 ZNFX1Q9P2E3 1918 aaKnown RBP14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 DNAJC25-GNG10A0A024R161 153 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 IGKV6D-21A0A0A0MT36 114 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 IQCA1LA6NCM1 817 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 POTEB2H3BUK9 544 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 LCA5LO95447 670 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 EPB41P11171 864 aaKnown RBP14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 PEX3P56589 373 aa14.9□□□□□ -0.02
CHMP4C-201ENST00000297265 POLR2FP61218 127 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms