RNA–Protein interactions for RNA: ENST00000296799.8

ARHGEF28-202, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ARHGEF28, Length 4,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-202ENST00000296799 HIP1RO75146 1068 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 SLC12A2P55011 1212 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 MAP7D1Q3KQU3 841 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 ANKRD40Q6AI12 368 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 RINT1Q6NUQ1 792 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 DHX40Q8IX18 779 aaKnown RBP16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 IFT122Q9HBG6 1241 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 TOPORSQ9NS56 1045 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 FBXO28Q9NVF7 368 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 ODF2LQ9ULJ1 636 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 TRIM49P0CI25 452 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 TRIM49CP0CI26 452 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 NMT1P30419 496 aaKnown RBP16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 MAN1A1P33908 653 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 COPB2P35606 906 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 VAMP7P51809 220 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 LMNB2Q03252 620 aa16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.33■□□□□ 0.2
ARHGEF28-202ENST00000296799 SNX1Q13596 522 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 KIAA1841Q6NSI8 718 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 ADGRA1Q86SQ6 560 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 RFX6Q8HWS3 928 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 BBOF1Q8ND07 529 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 ATP2A3Q93084 1043 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 TUFT1Q9NNX1 390 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 HOMER3Q9NSC5 361 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 GIPC1O14908 333 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 TBX3O15119 743 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 STAT5BP51692 787 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 POLR3FQ9H1D9 316 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 LRRD1A4D1F6 860 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 TXNP10599 105 aaKnown RBP16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 GNAT1P11488 350 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 PHBP35232 272 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 STK4Q13043 487 aa16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 TWF2Q6IBS0 349 aaKnown RBP16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF28-202ENST00000296799 SGK1O00141 431 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 STX2P32856 288 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ERICH1Q86X53 443 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 RHOT2Q8IXI1 618 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 PDLIM2Q96JY6 352 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ESYT2A0FGR8 921 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ASB14A6NK59 587 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 PSMC4P43686 418 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 PLTPP55058 493 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ACER1Q8TDN7 264 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ADAM22Q9P0K1 906 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 MAD1L1Q9Y6D9 718 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ARMCX2Q7L311 632 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 PBKQ96KB5 322 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 SLC38A10Q9HBR0 1119 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 MAD2L2Q9UI95 211 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 BAZ2BQ9UIF8 2168 aaKnown RBP16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 CTNND1O60716 968 aaKnown RBP16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 GGPS1O95749 300 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 DYNLT1P63172 113 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 GRIN1Q05586 938 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 ITKQ08881 620 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 VSIG1Q86XK7 387 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 SMC1BQ8NDV3 1235 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 AGBL1Q96MI9 1066 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 C2orf40Q9H1Z8 148 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
ARHGEF28-202ENST00000296799 GBP1P32455 592 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 IQCB1Q15051 598 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 KRT39Q6A163 491 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 TMEM270Q6UE05 265 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 ADSSL1Q8N142 457 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 CCT6BQ92526 530 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 KRT1P04264 644 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 HSPA6P17066 643 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 ATG4CQ96DT6 458 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 ARHGEF37A1IGU5 675 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 C2orf54Q08AI8 447 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
ARHGEF28-202ENST00000296799 MYMKA6NI61 221 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 PDXKO00764 312 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 CRCPO75575 148 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 FMR1Q06787 632 aaKnown RBP eCLIP16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 DPYDQ12882 1025 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 DRAP1Q14919 205 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 SIX6OS1Q8N1H7 587 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 CCNYQ8ND76 341 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 DPF2Q92785 391 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 RUNDC3BQ96NL0 473 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 ECE1P42892 770 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 ARPP19P56211 112 aa16.29■□□□□ 0.2
ARHGEF28-202ENST00000296799 ZNF699Q32M78 642 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms