RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 U2AF1L4Q8WU68 220 aaKnown RBP17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 EHMT1Q9H9B1 1298 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 METTL14Q9HCE5 456 aaKnown RBP17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 RAVER2Q9HCJ3 691 aaKnown RBP17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 STK24Q9Y6E0 443 aa17.27■□□□□ 0.35
NCKIPSD-201ENST00000294129 COL4A5P29400 1685 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 PSMC2P35998 433 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 KLHL7Q8IXQ5 586 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 NIM1KQ8IY84 436 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 MMGT1Q8N4V1 131 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 NACC1Q96RE7 527 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 GMLQ99445 158 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 OLFML3Q9NRN5 406 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 MYH11P35749 1972 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 PPP1R12BO60237 982 aaPredicted RBP17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 HIP1RO75146 1068 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 EIF2AK2P19525 551 aaKnown RBP17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 KRT12Q99456 494 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 NAGPAQ9UK23 515 aa17.26■□□□□ 0.35
NCKIPSD-201ENST00000294129 K7ENM7 598 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 WNT10BO00744 389 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 EXOC3O60645 756 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 LRRN2O75325 713 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 EGFRP00533 1210 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 MYCLP12524 364 aaPredicted RBP17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 TRAF1Q13077 416 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 CBWD6Q4V339 395 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 CBWD3Q5JTY5 395 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 CBWD5Q5RIA9 395 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 DPY19L2P1Q6NXN4 242 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 FAM71BQ8TC56 605 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 KCNH7Q9NS40 1196 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 PRLRP16471 622 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 ABCB4P21439 1286 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 BMT2Q1RMZ1 405 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZNF720Q7Z2F6 126 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 RTKN2Q8IZC4 609 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 CCDC43Q96MW1 224 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 PLCB1Q9NQ66 1216 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 TMEM51Q9NW97 253 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 STIM2Q9P246 746 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 FEM1BQ9UK73 627 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 FRMD4BQ9Y2L6 1034 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 SYF2O95926 243 aaKnown RBP17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 TAF4BQ92750 862 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 AGPAT3Q9NRZ7 376 aa17.25■□□□□ 0.35
NCKIPSD-201ENST00000294129 ASNSP08243 561 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 GUCY2DQ02846 1103 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 CXCL9Q07325 125 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 RASA3Q14644 834 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 PADI6Q6TGC4 694 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 FAM160B2Q86V87 743 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 EXOC4Q96A65 974 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 MXRA8Q9BRK3 442 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 GOLGA6BA6NDN3 693 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 GLI1P08151 1106 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 GLYCTKQ8IVS8 523 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 GOLGA6L1Q8N7Z2 621 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 EPB41L5Q9HCM4 733 aa17.24■□□□□ 0.35
NCKIPSD-201ENST00000294129 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 SLC16A3O15427 465 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 CEP104O60308 925 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 EVI5O60447 810 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 FLOT1O75955 427 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 HEXIM1O94992 359 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 FMO5P49326 533 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 RPS6KA1Q15418 735 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 TRADDQ15628 312 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 MUM1L1Q5H9M0 696 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 MEI1Q5TIA1 1274 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 DNAJC12Q9UKB3 198 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 SORBS3O60504 671 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 DRAP1Q14919 205 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 DNAJC21Q5F1R6 531 aaKnown RBP17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 DEFB132Q7Z7B7 95 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 AP1M1Q9BXS5 423 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 NFU1Q9UMS0 254 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 FZD1Q9UP38 647 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 CTDP1Q9Y5B0 961 aaPredicted RBP17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 PCDHGC5Q9Y5F6 944 aa17.23■□□□□ 0.35
NCKIPSD-201ENST00000294129 EIF3DO15371 548 aaKnown RBP eCLIP17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 CARSP49589 748 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 NSMFQ6X4W1 530 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 DAW1Q8N136 415 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 AENQ8WTP8 325 aaKnown RBP17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 BBXQ8WY36 941 aaPredicted RBP17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 MED4Q9NPJ6 270 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 DDX3XO00571 662 aaKnown RBP eCLIP17.22■□□□□ 0.354e-7■■■■■ 32.3
NCKIPSD-201ENST00000294129 STAT1P42224 750 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 DLG4P78352 724 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 SETQ01105 290 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms