RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 TFDP2Q14188 446 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 HDAC11Q96DB2 347 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 DYDC2Q96IM9 177 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 KIF2CQ99661 725 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 AP1M1Q9BXS5 423 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 ADAM22Q9P0K1 906 aa13.74□□□□□ -0.21
PTCD1-201ENST00000292478 CSF1RP07333 972 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 KRT10P13645 584 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 CD58P19256 250 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 AP3M2P53677 418 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 RBBP5Q15291 538 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 SF3B3Q15393 1217 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 FRMD5Q7Z6J6 570 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 SYNE4Q8N205 404 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 CNOT8Q9UFF9 292 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 PTPRMP28827 1452 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 NMT2O60551 498 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 BAG2O95816 211 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 ZBED1O96006 694 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 ANXA13P27216 316 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 QRICH1Q2TAL8 776 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 ATG16L1Q676U5 607 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 TTC19Q6DKK2 380 aaPredicted RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 TACO1Q9BSH4 297 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 FBXO2Q9UK22 296 aaPredicted RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 ADGRG1Q9Y653 693 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 PFASO15067 1338 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 TTC4O95801 387 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 PSMA2P25787 234 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 GPSM2P81274 684 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 FAM182BQ5T319 152 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 USP17L6PQ6QN14 398 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 LRGUKQ96M69 825 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 CLDN3O15551 220 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 SAT1P21673 171 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 MAPK6Q16659 721 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 C7orf31Q8N865 590 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 PYROXD1Q8WU10 500 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 TTC25Q96NG3 672 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 TUFT1Q9NNX1 390 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 CPSF3Q9UKF6 684 aaKnown RBP13.73□□□□□ -0.21
PTCD1-201ENST00000292478 NFU1Q9UMS0 254 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 MYO3AQ8NEV4 1616 aa13.73□□□□□ -0.21
PTCD1-201ENST00000292478 KIF28PB7ZC32 967 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 F5H6K3 240 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 HSPA8P11142 646 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 PHKA2P46019 1235 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SNAP25P60880 206 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 DYNLT1P63172 113 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 KLRC3Q07444 240 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ARID5BQ14865 1188 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 TRIM72Q6ZMU5 477 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SDCCAG3Q96C92 435 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SPDYE16A6NNV3 312 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 GGPS1O95749 300 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 PSMC5P62195 406 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SPDYE2Q495Y8 402 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 NSUN4Q96CB9 384 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 TDRD3Q9H7E2 651 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 EPS15L1Q9UBC2 864 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 LIMA1Q9UHB6 759 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 BAG5Q9UL15 447 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 VAMP7P51809 220 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 EPHA7Q15375 998 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 APOBEC3FQ8IUX4 373 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 GBP7Q8N8V2 638 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 PRPF38AQ8NAV1 312 aaKnown RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 FBXO41Q8TF61 875 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 PHF20Q9BVI0 1012 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 LRFN2Q9ULH4 789 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 CAPN11Q9UMQ6 739 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 POTEB3A0JP26 581 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 POTECB2RU33 542 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ZNF189O75820 626 aaPredicted RBP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ZRANB2O95218 330 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCD1-201ENST00000292478 JADE1Q6IE81 842 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 POTEBQ6S5H4 581 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ZNF34Q8IZ26 560 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 MTRQ99707 1265 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 ZNF609O15014 1411 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 C1orf167Q5SNV9 1468 aa13.72□□□□□ -0.21
PTCD1-201ENST00000292478 KIAA0391O15091 583 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms