RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 CCZ1BP86790 482 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 CCZ1P86791 482 aaPredicted RBP12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 LSM14BQ9BX40 385 aaKnown RBP12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 PSD3Q9NYI0 1048 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 ZC3H4Q9UPT8 1303 aaKnown RBP12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 MTMR1Q13613 665 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 ADGRF4Q8IZF3 695 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 C7orf31Q8N865 590 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 HVCN1Q96D96 273 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 AK8Q96MA6 479 aa12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 SCAF8Q9UPN6 1271 aaKnown RBP12.29□□□□□ -0.44
NPC1L1-201ENST00000289547 NHSL1Q5SYE7 1610 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 EVI5O60447 810 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 GCNT3O95395 438 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 PDHA1P08559 390 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 IRX4P78413 519 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 PPATQ06203 517 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 QRICH1Q2TAL8 776 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 PROM2Q8N271 834 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 WHAMMQ8TF30 809 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 GSDMAQ96QA5 445 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 NACC1Q96RE7 527 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 RPS6KC1Q96S38 1066 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 P4HA1P13674 534 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 CYP2B6P20813 491 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 LIG4P49917 911 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 CCDC117Q8IWD4 279 aaPredicted RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 COG1Q8WTW3 980 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 TUBGCP2Q9BSJ2 902 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 TBC1D7Q9P0N9 293 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 PPP6R2O75170 966 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 ATF7P17544 494 aaPredicted RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 RFX1P22670 979 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 HNRNPH1P31943 449 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 PDCD7Q8N8D1 485 aaKnown RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 KCNV2Q8TDN2 545 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 H0Y3Z8 333 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 MOCS3O95396 460 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 SLCO1A2P46721 670 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 UBE2SQ16763 222 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 LRRC8CQ8TDW0 803 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 COL4A3BPQ9Y5P4 624 aa12.28□□□□□ -0.44
NPC1L1-201ENST00000289547 NMT2O60551 498 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 MFAP3LO75121 409 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 RASA1P20936 1047 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 KRT76Q01546 638 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 ELMSAN1Q6PJG2 1045 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 NLRP14Q86W24 1093 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 INO80BQ9C086 356 aaPredicted RBP12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 MAGEF1Q9HAY2 307 aa12.27□□□□□ -0.44
NPC1L1-201ENST00000289547 LRRIQ4A6NIV6 560 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 THAP12O43422 761 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 SNX16P57768 344 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 RGMBQ6NW40 437 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 PLEKHH3Q7Z736 793 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 KATNAL1Q9BW62 490 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 GMNCA6NCL1 334 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 H2AFZP0C0S5 128 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 PLTPP55058 493 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 ZNF543Q08ER8 600 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 PFKFB3Q16875 520 aaPredicted RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 H2AFVQ71UI9 128 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 FAM163AQ96GL9 167 aaPredicted RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 DDX23Q9BUQ8 820 aaKnown RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 MROH8Q9H579 483 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 PLAAQ9Y263 795 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 RPN1P04843 607 aaKnown RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 RARBP10826 455 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 POLR2FP61218 127 aaKnown RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 CEP170P1Q96L14 293 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 LBHD1Q9BQE6 289 aaPredicted RBP12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 Q9H521 79 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 TXLNGQ9NUQ3 528 aa12.27□□□□□ -0.45
NPC1L1-201ENST00000289547 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 PLEKHA8P1O95397 391 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 IL9RQ01113 521 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 NFIAQ12857 509 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 CYB5R4Q7L1T6 521 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 SYMPKQ92797 1274 aaKnown RBP12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 ZBED2Q9BTP6 218 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 IRX2Q9BZI1 471 aaPredicted RBP12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 RNF14Q9UBS8 474 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 COMMD10Q9Y6G5 202 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 FTCDO95954 541 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 MMP1P03956 469 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 NLRP7Q8WX94 980 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 STK36Q9NRP7 1315 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 SFNP31947 248 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 Q3C1V9 767 aa12.26□□□□□ -0.45
NPC1L1-201ENST00000289547 CAPN12Q6ZSI9 719 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms