RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 SFNP31947 248 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 CIITAP33076 1130 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 PLA2G5P39877 138 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 USP11P51784 963 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 JAK3P52333 1124 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 COL19A1Q14993 1142 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 LRCH2Q5VUJ6 765 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 ADHFE1Q8IWW8 467 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 THNSL1Q8IYQ7 743 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 DISC1Q9NRI5 854 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 CD207Q9UJ71 328 aa15.86■□□□□ 0.13
TPM1-202ENST00000288398 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 DCXO43602 365 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 PDIA3P30101 505 aaKnown RBP15.85■□□□□ 0.13
TPM1-202ENST00000288398 GATMP50440 423 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 CLCN3P51790 818 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 UBE3AQ05086 875 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 SMAD4Q13485 552 aaKnown RBP15.85■□□□□ 0.13
TPM1-202ENST00000288398 EFCAB12Q6NXP0 572 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 RUFY3Q7L099 469 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 SPPL3Q8TCT6 385 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 KHSRPQ92945 711 aaKnown RBP eCLIP15.85■□□□□ 0.13
TPM1-202ENST00000288398 RIT2Q99578 217 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 CDHR5Q9HBB8 845 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 NCOA5Q9HCD5 579 aaKnown RBP15.85■□□□□ 0.13
TPM1-202ENST00000288398 TMEM161AQ9NX61 479 aa15.85■□□□□ 0.13
TPM1-202ENST00000288398 PRR33A8MZF0 331 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 ZBTB42B2RXF5 422 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 MSH4O15457 936 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 MGEA5O60502 916 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 DEXIO95424 95 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 SRGAP2BP0DMP2 458 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 LAG3P18627 525 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 ATP4AP20648 1035 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 NRIP1P48552 1158 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 NLRP11P59045 1033 aaKnown RBP15.84■□□□□ 0.13
TPM1-202ENST00000288398 PRKCEQ02156 737 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 ZP2Q05996 745 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 TBC1D8BQ0IIM8 1120 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 CTC1Q2NKJ3 1217 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 MIER3Q7Z3K6 550 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 RBM23Q86U06 439 aaKnown RBP15.84■□□□□ 0.13
TPM1-202ENST00000288398 FAM228AQ86W67 206 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 CRIPAKQ8N1N5 446 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 TMEM40Q8WWA1 233 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 AGXT2Q9BYV1 514 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 TLE6Q9H808 572 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 TLR9Q9NR96 1032 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
TPM1-202ENST00000288398 PCDHA4Q9UN74 947 aa15.84■□□□□ 0.13
TPM1-202ENST00000288398 C9IYK1 514 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 MBTPS2O43462 519 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
TPM1-202ENST00000288398 GPR32O75388 356 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 LTBRP36941 435 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 DNM2P50570 870 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 SMAD2Q15796 467 aaKnown RBP15.83■□□□□ 0.12
TPM1-202ENST00000288398 NTRK3Q16288 839 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 LRRC71Q8N4P6 559 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 EFHBQ8N7U6 833 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 RNF169Q8NCN4 708 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 TBCKQ8TEA7 893 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 NLRP7Q8WX94 980 aa15.83■□□□□ 0.12
TPM1-202ENST00000288398 ELAC1Q9H777 363 aaKnown RBP15.83■□□□□ 0.12
TPM1-202ENST00000288398 SEPT9Q9UHD8 586 aaPredicted RBP15.83■□□□□ 0.12
TPM1-202ENST00000288398 ARIH1Q9Y4X5 557 aaPredicted RBP15.83■□□□□ 0.12
TPM1-202ENST00000288398 ADAMTS3O15072 1205 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 LINC01565O15544 149 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 TBX10O75333 385 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 CDKL5O76039 1030 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 FGF18O76093 207 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 NEFLP07196 543 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 FGFR1P11362 822 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 XBP1P17861 261 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 EIF4BP23588 611 aaKnown RBP15.82■□□□□ 0.12
TPM1-202ENST00000288398 DNAJB1P25685 340 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 GTF2F1P35269 517 aaKnown RBP eCLIP15.82■□□□□ 0.12
TPM1-202ENST00000288398 IRS1P35568 1242 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 CDC42EP1Q00587 391 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 DLX2Q07687 328 aaPredicted RBP15.82■□□□□ 0.12
TPM1-202ENST00000288398 ADAM15Q13444 863 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 FAM102BQ5T8I3 360 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 GALNT17Q6IS24 598 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 PDE12Q6L8Q7 609 aaKnown RBP15.82■□□□□ 0.12
TPM1-202ENST00000288398 BLIDQ8IZY5 108 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 COLGALT1Q8NBJ5 622 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 RDM1Q8NG50 284 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 SLC5A5Q92911 643 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 LENG9Q96B70 501 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 TMEM117Q9H0C3 514 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 ZSWIM6Q9HCJ5 1215 aa15.82■□□□□ 0.12
TPM1-202ENST00000288398 TYW1Q9NV66 732 aaKnown RBP15.82■□□□□ 0.12
TPM1-202ENST00000288398 MYH9P35579 1960 aaKnown RBP15.81■□□□□ 0.12
TPM1-202ENST00000288398 PPM1AP35813 382 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 EVCP57679 992 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 KRT17Q04695 432 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 STK3Q13188 491 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 CAMK1Q14012 370 aa15.81■□□□□ 0.12
TPM1-202ENST00000288398 NONOQ15233 471 aaKnown RBP eCLIP15.81■□□□□ 0.12
TPM1-202ENST00000288398 MTERF2Q49AM1 385 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms