RNA–Protein interactions for RNA: ENST00000287546.8

VPS8-201, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS8, Length 5,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-201ENST00000287546 CFAP221Q4G0U5 840 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 SYT2Q8N9I0 419 aaPredicted RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 DYDC1Q8WWB3 177 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 FNBP1Q96RU3 617 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 MLXIPQ9HAP2 919 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 PNMA3Q9UL41 463 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 ZBTB12Q9Y330 459 aaPredicted RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 JRKLQ9Y4A0 524 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 NUB1Q9Y5A7 615 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 ATRNL1Q5VV63 1379 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 PIK3CDO00329 1044 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 MAFGO15525 162 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 CTIFO43310 598 aaKnown RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 GYPCP04921 128 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 CYP3A4P08684 503 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 HARSP12081 509 aaKnown RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 ZSCAN20P17040 1043 aaPredicted RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 COPB2P35606 906 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 QARSP47897 775 aaKnown RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 WDR44Q5JSH3 913 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 C4orf50Q6ZRC1 276 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 NSUN6Q8TEA1 469 aaKnown RBP7.52□□□□□ -1.21
VPS8-201ENST00000287546 RMDN3Q96TC7 470 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 KCNQ5Q9NR82 932 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 PPP2R3BQ9Y5P8 575 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 MYH1P12882 1939 aa7.52□□□□□ -1.21
VPS8-201ENST00000287546 NR3C1P04150 777 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 PSAPP07602 524 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 LMNB1P20700 586 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 BMP6P22004 513 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 TMOD1P28289 359 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CIITAP33076 1130 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CYP2J2P51589 502 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 KIF11P52732 1056 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 TRPC3Q13507 836 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CTTNQ14247 550 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 MIS18BP1Q6P0N0 1132 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 MICALL2Q8IY33 904 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 ANKRD35Q8N283 1001 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 RDM1Q8NG50 284 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 TBC1D31Q96DN5 1066 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 SRPK1Q96SB4 655 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 KIF9Q9HAQ2 790 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 LAMB1P07942 1786 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CXCL9Q07325 125 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 PPP2R5EQ16537 467 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 FAM160B1Q5W0V3 765 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 INTS8Q75QN2 995 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 RNF10Q8N5U6 811 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 MCPH1Q8NEM0 835 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 DYDC2Q96IM9 177 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CALR3Q96L12 384 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 WRNIP1Q96S55 665 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 JPH2Q9BR39 696 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 TMEM39BQ9GZU3 492 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 RNF146Q9NTX7 359 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CNOT7Q9UIV1 285 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 C10orf71Q711Q0 1435 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 TNS1Q9HBL0 1735 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 SSU72P8A0A1W2PR75 194 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 H2AFZP0C0S5 128 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 SNRPFP62306 86 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 CDK17Q00537 523 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 FAM102BQ5T8I3 360 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 H2AFVQ71UI9 128 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 NIPA1Q7RTP0 329 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 EEF2KMTQ96G04 330 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CAPZA3Q96KX2 299 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 MXRA8Q9BRK3 442 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 MKNK1Q9BUB5 465 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 IQCGQ9H095 443 aaKnown RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 NRBP2Q9NSY0 501 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 ANKFY1Q9P2R3 1169 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 A0A1B0GUL6 1792 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 M0R2N6 131 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 VEGFAP15692 232 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 SSTR3P32745 418 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 STAT3P40763 770 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 NOVP48745 357 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 FXR1P51114 621 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS8-201ENST00000287546 FAM193AP78312 1265 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 MYL7Q01449 175 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CACNB1Q02641 598 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 PPFIA1Q13136 1202 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 PTPN21Q16825 1174 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 TBC1D10BQ4KMP7 808 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 MTMR14Q8NCE2 650 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 SYN2Q92777 582 aaPredicted RBP7.51□□□□□ -1.21
VPS8-201ENST00000287546 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 ADPGKQ9BRR6 497 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 FAM50BQ9Y247 325 aa7.51□□□□□ -1.21
VPS8-201ENST00000287546 CCDC151A5D8V7 595 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 RHOXF2BP0C7M4 288 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 EIF2AK2P19525 551 aaKnown RBP7.5□□□□□ -1.21
VPS8-201ENST00000287546 SCP2P22307 547 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 EIF4A3P38919 411 aaKnown RBP7.5□□□□□ -1.21
VPS8-201ENST00000287546 ARL4DP49703 201 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 PSMC5P62195 406 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 PRKCQQ04759 706 aa7.5□□□□□ -1.21
VPS8-201ENST00000287546 SPP2Q13103 211 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms