RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 TUBB2BQ9BVA1 445 aa8.29□□□□□ -1.08
TRIM42-201ENST00000286349 HOXC10Q9NYD6 342 aa8.29□□□□□ -1.08
TRIM42-201ENST00000286349 CAPN11Q9UMQ6 739 aa8.29□□□□□ -1.08
TRIM42-201ENST00000286349 LUC7L2Q9Y383 392 aaKnown RBP8.29□□□□□ -1.08
TRIM42-201ENST00000286349 A0A1W2PQJ5 194 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 GCOM1H8Y6P7 765 aaPredicted RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 E2F6O75461 281 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 AP1G2O75843 785 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 GNA14O95837 355 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 PLA2G4BP0C869 781 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 POLR2MP0CAP2 368 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 TGFB3P10600 412 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 FCER1AP12319 257 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 FOSL1P15407 271 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 RPA1P27694 616 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ZNF76P36508 570 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MTIF2P46199 727 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 NEDD9Q14511 834 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 NAA30Q147X3 362 aaPredicted RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 PRR16Q569H4 304 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 SPRYD7Q5W111 196 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 TRIM65Q6PJ69 517 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 PPP4R3CPQ6ZMV5 832 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 RASAL3Q86YV0 1011 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 OR8K1Q8NGG5 319 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 TBC1D5Q92609 795 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 WNK4Q96J92 1243 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MS4A4AQ96JQ5 239 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 NOC4LQ9BVI4 516 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 IRX2Q9BZI1 471 aaPredicted RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 SLC39A2Q9NP94 309 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 PANK4Q9NVE7 773 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ZNHIT6Q9NWK9 470 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MYO1AQ9UBC5 1043 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 DNAI1Q9UI46 699 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ODF2LQ9ULJ1 636 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 KCNH4Q9UQ05 1017 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MYH7BA7E2Y1 1941 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MMEP08473 750 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 IDEP14735 1019 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ATICP31939 592 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 KRT9P35527 623 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ZNF132P52740 706 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 BACE1P56817 501 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 GOLGA8FQ08AF8 430 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 GOLGA8DPQ0D2H9 430 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MTMR2Q13614 643 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ZYXQ15942 572 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 RGMBQ6NW40 437 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 DYMQ7RTS9 669 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 SPATA21Q7Z572 469 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ARL10Q8N8L6 244 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 CPLX3Q8WVH0 158 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 TCP11Q8WWU5 503 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 LPAR1Q92633 364 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 ERGIC2Q96RQ1 377 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 KIAA1683Q9H0B3 1180 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 CREBZFQ9NS37 354 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 MAP3K20Q9NYL2 800 aaKnown RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 KIAA1024Q9UPX6 916 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 DNM3Q9UQ16 869 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 N6AMT1Q9Y5N5 214 aa8.28□□□□□ -1.08
TRIM42-201ENST00000286349 V9GYY5 206 aaPredicted RBP8.28□□□□□ -1.08
TRIM42-201ENST00000286349 OTOFQ9HC10 1997 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 HOXD10P28358 340 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FXR1P51114 621 aaKnown RBP eCLIP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 ZNF157P51786 506 aaPredicted RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FKBP3Q00688 224 aaKnown RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 COASYQ13057 564 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 PPIL2Q13356 520 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 KRT72Q14CN4 511 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 MAN2A1Q16706 1144 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 PTPN21Q16825 1174 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FAM26FQ5R3K3 315 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FAM83BQ5T0W9 1011 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 GPAT2Q6NUI2 795 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TOGARAM2Q6ZUX3 1019 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 UBE2Q1Q7Z7E8 422 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 SPICE1Q8N0Z3 855 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 DNAJC19Q96DA6 116 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 CEP63Q96MT8 703 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 NUDT12Q9BQG2 462 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TBC1D7Q9P0N9 293 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 ABT1Q9ULW3 272 aaKnown RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 ADGRG1Q9Y653 693 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 A0A0G2JLL6 359 aaPredicted RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 FRMD3A2A2Y4 597 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 SOWAHDA6NJG2 315 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TRIM64CA6NLI5 447 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 CXCL11O14625 94 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 COBLO75128 1261 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 ERLIN1O75477 346 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 KRT18P05783 430 aaKnown RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TRIM21P19474 475 aaKnown RBP8.27□□□□□ -1.09
TRIM42-201ENST00000286349 HMGCS2P54868 508 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 GNG11P61952 73 aa8.27□□□□□ -1.09
TRIM42-201ENST00000286349 TUBB4BP68371 445 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms