RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 DGKHQ86XP1 1220 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 RAD54LQ92698 747 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 FAM163AQ96GL9 167 aaPredicted RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 MKNK2Q9HBH9 465 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 ATP8A2Q9NTI2 1148 aa12.36□□□□□ -0.43
SCLT1-201ENST00000281142 SAP30BPQ9UHR5 308 aaKnown RBP12.36□□□□□ -0.43
SCLT1-201ENST00000281142 PALM3A6NDB9 673 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 C5orf60A6NFR6 353 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 KRIT1O00522 736 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 CAND2O75155 1236 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 TSPY3P0CV98 308 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 TSPY8P0CW00 308 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 ZBTB48P10074 688 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 SLC9A1P19634 815 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 BTDP43251 543 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 USP11P51784 963 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 CALCRLQ16602 461 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 HIBCHQ6NVY1 386 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 KRT25Q7Z3Z0 450 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 MYOCDQ8IZQ8 938 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 TEKT1Q969V4 418 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 LRRC45Q96CN5 670 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 PIGSQ96S52 555 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 BAIAP2L1Q9UHR4 511 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 ATP8A1Q9Y2Q0 1164 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 FOCADQ5VW36 1801 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 GPR75-ASB3A0A0A6YYF3 556 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 PVALEFA0A1B0GWK0 134 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 FGFR1OPO95684 399 aaKnown RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 IRX1P78414 480 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 CUL1Q13616 776 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 TLDC1Q6P9B6 456 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 HHIPL2Q6UWX4 724 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 LRRC57Q8N9N7 239 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 TSG101Q99816 390 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 GANQ9H2C0 597 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 SERPINA10Q9UK55 444 aa12.35□□□□□ -0.43
SCLT1-201ENST00000281142 AJAP1Q9UKB5 411 aaPredicted RBP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.35□□□□□ -0.43
SCLT1-201ENST00000281142 ABCB11O95342 1321 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 F8VZ95 297 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 EGFRP00533 1210 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 RPS12P25398 132 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 FKBP3Q00688 224 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 NBPF20Q3BBV1 942 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 C12orf60Q5U649 245 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 DNAJC19Q96DA6 116 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 GGT7Q9UJ14 662 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 PGRMC1O00264 195 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 LDHCP07864 332 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 CALRP27797 417 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 RBM5P52756 815 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 XRCC4Q13426 336 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 BIRC3Q13489 604 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 PPP1R7Q15435 360 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 SBK1Q52WX2 424 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 RUFY4Q6ZNE9 571 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 SLF2Q8IX21 1173 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 MICALL2Q8IY33 904 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 UHMK1Q8TAS1 419 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 SH3RF3Q8TEJ3 882 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 COA7Q96BR5 231 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 STAMBPL1Q96FJ0 436 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 ZDHHC15Q96MV8 337 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 MRIQ9BWK5 157 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 EDEM3Q9BZQ6 932 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 CTNND1O60716 968 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 CLSTN1O94985 981 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 CDC25CP30307 473 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 TRIM59Q8IWR1 403 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 TCP11Q8WWU5 503 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 CNOT7Q9UIV1 285 aaKnown RBP12.34□□□□□ -0.43
SCLT1-201ENST00000281142 L3MBTL1Q9Y468 752 aa12.34□□□□□ -0.43
SCLT1-201ENST00000281142 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 ATP6V1G2O95670 118 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 GNAQP50148 359 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 RHBDL3P58872 404 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 SARNPP82979 210 aaKnown RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 GRIK3Q13003 919 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 LACTB2Q53H82 288 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 AGBL2Q5U5Z8 902 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 GALNT17Q6IS24 598 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 GJB7Q6PEY0 223 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 IRF2BP2Q7Z5L9 587 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 ACTRT1Q8TDG2 376 aa12.33□□□□□ -0.44
SCLT1-201ENST00000281142 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 PRMT6Q96LA8 375 aaPredicted RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 XPO6Q96QU8 1125 aaKnown RBP12.33□□□□□ -0.44
SCLT1-201ENST00000281142 SELENOSQ9BQE4 189 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms