RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 MAFBQ9Y5Q3 323 aaPredicted RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 K7ENM7 598 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 EPHB6O15197 1021 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 STAM2O75886 525 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 ATG7O95352 703 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 ARHGAP1Q07960 439 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 METTL7BQ6UX53 244 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 DHX37Q8IY37 1157 aaKnown RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 AFG1LQ8WV93 481 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 TUBGCP2Q9BSJ2 902 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 LRRC27Q9C0I9 530 aa12.93□□□□□ -0.34
SSRP1-201ENST00000278412 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
SSRP1-201ENST00000278412 RASSF10A6NK89 507 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 LYPLA2O95372 231 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 SMPD1P17405 629 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 GUCY2CP25092 1073 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 ZSCAN30Q86W11 494 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 LRRC71Q8N4P6 559 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 NEK9Q8TD19 979 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 NOC3LQ8WTT2 800 aaKnown RBP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 GLG1Q92896 1179 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 CEP89Q96ST8 783 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 RNPEPQ9H4A4 650 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 PCIF1Q9H4Z3 704 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 USP27XA6NNY8 438 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 PBX1P40424 430 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 STAT5BP51692 787 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 CCZ1BP86790 482 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 CCZ1P86791 482 aaPredicted RBP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 UBXN1Q04323 297 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 TRIM32Q13049 653 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 PSMD2Q13200 908 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 KNOP1Q1ED39 458 aaKnown RBP12.92□□□□□ -0.34
SSRP1-201ENST00000278412 MORC4Q8TE76 937 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
SSRP1-201ENST00000278412 IGKV6D-21A0A0A0MT36 114 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 TTLL13PA6NNM8 815 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 CCDC169A6NNP5 214 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ZBTB42B2RXF5 422 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
SSRP1-201ENST00000278412 AKAP3O75969 853 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 OATP04181 439 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 EDN1P05305 212 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 NR2F2P24468 414 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 MTIF2P46199 727 aaKnown RBP12.91□□□□□ -0.34
SSRP1-201ENST00000278412 RBL2Q08999 1139 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF784Q8NCA9 323 aaPredicted RBP12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ELMO3Q96BJ8 720 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 TINF2Q9BSI4 451 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 CRACR2AQ9BSW2 395 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 THAP9Q9H5L6 903 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 SLC26A4O43511 780 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 CYP2J2P51589 502 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 IGBP1P78318 339 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ADAM9Q13443 819 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 COBLL1Q53SF7 1204 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 MORN1Q5T089 497 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 ASAP3Q8TDY4 903 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 MAP7D2Q96T17 732 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 OLFML3Q9NRN5 406 aa12.91□□□□□ -0.34
SSRP1-201ENST00000278412 BICDL2A1A5D9 508 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 LRRC10BA6NIK2 292 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 LRRN2O75325 713 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 GYPCP04921 128 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 NPTX2P47972 431 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 NEDD9Q14511 834 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 ZNF507Q8TCN5 953 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 CBWD1Q9BRT8 395 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 PDLIM7Q9NR12 457 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 PPP1R37O75864 691 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 TOMM70O94826 608 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 CASP14P31944 242 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 COPB2P35606 906 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 TBX2Q13207 712 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 MKRN4PQ13434 485 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 MTF1Q14872 753 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 EMC2Q15006 297 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 CT47A1Q5JQC4 288 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 SPECC1LQ69YQ0 1117 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 TC2NQ8N9U0 490 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 NOC4LQ9BVI4 516 aaKnown RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 POLR3FQ9H1D9 316 aaPredicted RBP12.9□□□□□ -0.34
SSRP1-201ENST00000278412 SUGCTQ9HAC7 445 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 GJD2Q9UKL4 321 aa12.9□□□□□ -0.34
SSRP1-201ENST00000278412 A0A0U1RQJ8 604 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 GOLGA8IPA6NC78 632 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 ASB14A6NK59 587 aa12.89□□□□□ -0.35
SSRP1-201ENST00000278412 GOLGA8JA6NMD2 632 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms