RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 TMEM35BQ8NCS4 154 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 RBM46Q8TBY0 533 aaKnown RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 ATP8A1Q9Y2Q0 1164 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 CCDC160A6NGH7 325 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 INHBAP08476 426 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 PDE1BQ01064 536 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 SEMA3FQ13275 785 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 TWF2Q6IBS0 349 aaKnown RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF668Q96K58 619 aaPredicted RBP12.15□□□□□ -0.46
USP6NL-201ENST00000277575 MMP19Q99542 508 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 KLHL14Q9P2G3 628 aa12.15□□□□□ -0.46
USP6NL-201ENST00000277575 LRRC53A6NM62 1247 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PDHBP11177 359 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 C2orf54Q08AI8 447 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 BIRC2Q13490 618 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 RHPN2Q8IUC4 686 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SMAP1Q8IYB5 467 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 KCTD6Q8NC69 237 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 FAM71BQ8TC56 605 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 BCAS4Q8TDM0 211 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PPP4R1Q8TF05 950 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 VCPKMTQ9H867 229 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PRR12Q9ULL5 1215 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 TYW5A2RUC4 315 aaKnown RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 CCDC151A5D8V7 595 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PFDN6O15212 129 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 ACTN1P12814 892 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 BAATQ14032 418 aaPredicted RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PRPSAP1Q14558 356 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 HAUS6Q7Z4H7 955 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 CACNA2D3Q8IZS8 1091 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SLC12A6Q9UHW9 1150 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SCINQ9Y6U3 715 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 PSMD14O00487 310 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 TEX33O43247 280 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 EYA4O95677 639 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 COPB2P35606 906 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 VAMP7P51809 220 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 RWDD2BP57060 319 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 TNFAIP2Q03169 654 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 C4orf50Q6ZRC1 276 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SPATA33Q96N06 139 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 CAPS2Q9BXY5 557 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 C2orf40Q9H1Z8 148 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 RASSF4Q9H2L5 321 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 ANAPC5Q9UJX4 755 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 KSR1Q8IVT5 923 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 GPATCH11Q8N954 259 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 DNAAF3Q8N9W5 541 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 SLC9A2Q9UBY0 812 aa12.14□□□□□ -0.47
USP6NL-201ENST00000277575 CNOT8Q9UFF9 292 aaKnown RBP12.14□□□□□ -0.47
USP6NL-201ENST00000277575 IQSEC2Q5JU85 1478 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ZNF18P17022 549 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 DHX9Q08211 1270 aaKnown RBP12.13□□□□□ -0.47
USP6NL-201ENST00000277575 KCNB1Q14721 858 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ANGEL2Q5VTE6 544 aaKnown RBP12.13□□□□□ -0.47
USP6NL-201ENST00000277575 TMEM270Q6UE05 265 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 SLC16A10Q8TF71 515 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ELP3Q9H9T3 547 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 PRKAG2Q9UGJ0 569 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 TTC26A0AVF1 554 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 KLRK1P26718 216 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 PPP4CP60510 307 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 PSMD6Q15008 389 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 SLC15A2Q16348 729 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 DARS2Q6PI48 645 aaKnown RBP12.13□□□□□ -0.47
USP6NL-201ENST00000277575 POLR3FQ9H1D9 316 aaPredicted RBP12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ANAPC7Q9UJX3 599 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 CPSF3Q9UKF6 684 aaKnown RBP12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ADGRB1O14514 1584 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 DPEP1P16444 411 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ZSCAN26Q16670 478 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 CYFIP1Q7L576 1253 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 SAAL1Q96ER3 474 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 AP1M1Q9BXS5 423 aa12.13□□□□□ -0.47
USP6NL-201ENST00000277575 ASB14A6NK59 587 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 SEC31AO94979 1220 aaKnown RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TRIM49P0CI25 452 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 JPH1Q9HDC5 661 aaPredicted RBP12.12□□□□□ -0.47
USP6NL-201ENST00000277575 GGA3Q9NZ52 723 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 HIP1RO75146 1068 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 GYS1P13807 737 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 IFNAR2P48551 515 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 CDO1Q16878 200 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 KRT39Q6A163 491 aa12.12□□□□□ -0.47
USP6NL-201ENST00000277575 SH2D3AQ9BRG2 576 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms