RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 GNPTABQ3T906 1256 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 DPY19L2P1Q6NXN4 242 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 MOB2Q70IA6 237 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 HS2ST1Q7LGA3 356 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 SMAP1Q8IYB5 467 aaPredicted RBP10.52□□□□□ -0.72
TRIM55-201ENST00000276573 ANKRD35Q8N283 1001 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 SLC35F6Q8N357 371 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 GOLGA5Q8TBA6 731 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 OTUD5Q96G74 571 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 SH2D3AQ9BRG2 576 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 NLRC4Q9NPP4 1024 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 AGPAT3Q9NRZ7 376 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 GABBR1Q9UBS5 961 aa10.52□□□□□ -0.72
TRIM55-201ENST00000276573 PAPPA2Q9BXP8 1791 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SPDYE5A6NIY4 337 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 EIF3JO75822 258 aaKnown RBP10.52□□□□□ -0.73
TRIM55-201ENST00000276573 IPO7O95373 1038 aaKnown RBP10.52□□□□□ -0.73
TRIM55-201ENST00000276573 PSAPP07602 524 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 ICAM3P32942 547 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 NPEPPSP55786 919 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.73
TRIM55-201ENST00000276573 MYBPC2Q14324 1141 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 UTP14CQ5TAP6 766 aaKnown RBP10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SWSAP1Q6NVH7 229 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 ANO5Q75V66 913 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 OTUD6AQ7L8S5 288 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 KIAA1328Q86T90 577 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 FAM186BQ8IYM0 893 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SYCP3Q8IZU3 236 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SLC35C1Q96A29 364 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 DRC1Q96MC2 740 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 CCDC43Q96MW1 224 aaKnown RBP10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SPATC1LQ9H0A9 340 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 GANQ9H2C0 597 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 ST6GALNAC4Q9H4F1 302 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 PLCB1Q9NQ66 1216 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 SLC9A2Q9UBY0 812 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 GUCA1BQ9UMX6 200 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 KCNH4Q9UQ05 1017 aa10.52□□□□□ -0.73
TRIM55-201ENST00000276573 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 K7ENM7 598 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ZNF263O14978 683 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ZNF862O60290 1169 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 LCA5LO95447 670 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 SLC9A1P19634 815 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 PON1P27169 355 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ACTR2P61160 394 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 CYP27A1Q02318 531 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 APBA1Q02410 837 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 FSTL1Q12841 308 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 MAPK8IP2Q13387 824 aaPredicted RBP10.51□□□□□ -0.73
TRIM55-201ENST00000276573 TTLL12Q14166 644 aaPredicted RBP10.51□□□□□ -0.73
TRIM55-201ENST00000276573 SPA17Q15506 151 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 EXOC3L4Q17RC7 722 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 CCDC122Q5T0U0 273 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 SFMBT2Q5VUG0 894 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 HGSNATQ68CP4 663 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 PLA2G4FQ68DD2 849 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ABHD15Q6UXT9 468 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 TRMT1LQ7Z2T5 733 aaKnown RBP10.51□□□□□ -0.73
TRIM55-201ENST00000276573 LRRN4CLQ8ND94 238 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 JAKMIP2Q96AA8 810 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ACCSQ96QU6 501 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 CARD6Q9BX69 1037 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 ASCC2Q9H1I8 757 aaPredicted RBP10.51□□□□□ -0.73
TRIM55-201ENST00000276573 TMEM206Q9H813 350 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 TRIM10Q9UDY6 481 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 TELO2Q9Y4R8 837 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 MRFAP1Q9Y605 127 aa10.51□□□□□ -0.73
TRIM55-201ENST00000276573 PFASO15067 1338 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SSU72P8A0A1W2PR75 194 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CTAGE9A4FU28 777 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SOWAHBA6NEL2 793 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 KRT86O43790 486 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TLR2O60603 784 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CNMDO75829 334 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 ACTN1P12814 892 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 KIF11P52732 1056 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 IRX3P78415 501 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 GTF2BQ00403 316 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SP2Q02086 613 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 PPIL2Q13356 520 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TUBB2AQ13885 445 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 ASTE1Q2TB18 679 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 DCAF17Q5H9S7 520 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 KLHDC7AQ5VTJ3 777 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TCERG1LQ5VWI1 586 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 GBP6Q6ZN66 633 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 HAUS6Q7Z4H7 955 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TMEM174Q8WUU8 243 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 ATP6V0A1Q93050 837 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TUBB2BQ9BVA1 445 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 LACRTQ9GZZ8 138 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 AIPL1Q9NZN9 384 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CGNQ9P2M7 1197 aaKnown RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 TFR2Q9UP52 801 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 FRMD4BQ9Y2L6 1034 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms