RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 AMFRQ9UKV5 643 aa20.27■□□□□ 0.84
SSC4D-201ENST00000275560 RSPH10B2B2RC85 870 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 RSPH10BP0C881 870 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 XRCC5P13010 732 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 PABPC4Q13310 644 aaKnown RBP eCLIP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 EPHA7Q15375 998 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 C10orf76Q5T2E6 689 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 C16orf86Q6ZW13 317 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 SFR1Q86XK3 245 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 MARCH10Q8NA82 808 aaPredicted RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 ARHGEF26Q96DR7 871 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 SEMA4AQ9H3S1 761 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 SWAP70Q9UH65 585 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 FOXO6A8MYZ6 492 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L15C9J2P7 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L13C9JLJ4 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L11C9JVI0 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L18D6R9N7 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L22D6RA61 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L17D6RBQ6 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L19D6RCP7 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L20D6RJB6 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 KCNQ2O43526 872 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 NEBLO76041 1014 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 FGFR4P22455 802 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 MRPL12P52815 198 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 PMS2P54278 862 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L24Q0WX57 530 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 LRRC14Q15048 493 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 USP17L6PQ6QN14 398 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 CCDC50Q8IVM0 306 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 TEX11Q8IYF3 940 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 CUL5Q93034 780 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 C18orf8Q96DM3 657 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 TAS2R14Q9NYV8 317 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 PCDHB13Q9Y5F0 798 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 KRT13P13646 458 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 KCNJ2P63252 427 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 DDX60LQ5H9U9 1706 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 MGARPQ8TDB4 240 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 FAXDC2Q96IV6 333 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 SEPT11Q9NVA2 429 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 DBR1Q9UK59 544 aaKnown RBP20.26■□□□□ 0.83
SSC4D-201ENST00000275560 NENFQ9UMX5 172 aa20.26■□□□□ 0.83
SSC4D-201ENST00000275560 DDX3YO15523 660 aaKnown RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 SLURP2P0DP57 97 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 KLRC3Q07444 240 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ORC2Q13416 577 aaPredicted RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ARMC9Q7Z3E5 817 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 PALB2Q86YC2 1186 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ALG3Q92685 438 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 PRCCQ92733 491 aaPredicted RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 TACO1Q9BSH4 297 aaKnown RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 RTFDC1Q9BY42 306 aaPredicted RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 CNOT10Q9H9A5 744 aaKnown RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ATP6V0A4Q9HBG4 840 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 MLXIPLQ9NP71 852 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 DAAM1Q9Y4D1 1078 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 EVI5O60447 810 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 LLGL1Q15334 1064 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 DENND2CQ68D51 928 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 DUPD1Q68J44 220 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ZDHHC24Q6UX98 284 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 OLIG1Q8TAK6 271 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 NSMCE1Q8WV22 266 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 NLRP3Q96P20 1036 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 ERP44Q9BS26 406 aa20.25■□□□□ 0.83
SSC4D-201ENST00000275560 INTS9Q9NV88 658 aaKnown RBP20.25■□□□□ 0.83
SSC4D-201ENST00000275560 SFI1A8K8P3 1242 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 A8MUI8 341 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 GHRP10912 638 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 SLC8A1P32418 973 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 FOXR2Q6PJQ5 311 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 ADGRF4Q8IZF3 695 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 NEK9Q8TD19 979 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 JMJD4Q9H9V9 463 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 SLC12A4Q9UP95 1085 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 BZW2Q9Y6E2 419 aaKnown RBP20.24■□□□□ 0.83
SSC4D-201ENST00000275560 ATAD5Q96QE3 1844 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 ROBO1Q9Y6N7 1651 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 RGS16O15492 202 aaPredicted RBP20.24■□□□□ 0.83
SSC4D-201ENST00000275560 PRKCIP41743 596 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 MMP13P45452 471 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 PTENP60484 403 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 PPP2R5AQ15172 486 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 OTUD6AQ7L8S5 288 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 ANKS4BQ8N8V4 417 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 LMBR1Q8WVP7 490 aa20.24■□□□□ 0.83
SSC4D-201ENST00000275560 RPTORQ8N122 1335 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 MARCKSL1P49006 195 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 SLC12A3P55017 1021 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 JAM2P57087 298 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 NFIXQ14938 502 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 SEPT2Q15019 361 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 PIGWQ7Z7B1 504 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 HOOK3Q86VS8 718 aa20.23■□□□□ 0.83
SSC4D-201ENST00000275560 JAMLQ86YT9 394 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms