RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MEFVO15553 781 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 PSMA2P25787 234 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 BTDP43251 543 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 DEFA1P59665 94 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 DEFA3P59666 94 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 CAPRIN1Q14444 709 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 HIC1Q14526 733 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 FRA10AC1Q70Z53 315 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 POLE3Q9NRF9 147 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 BLOC1S6Q9UL45 172 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 LDHAP00338 332 aaKnown RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 CDH2P19022 906 aaPredicted RBP9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 GPC5P78333 572 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 TTC8Q8TAM2 541 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 ABHD10Q9NUJ1 306 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 ARL2BPQ9Y2Y0 163 aa9.3□□□□□ -0.92
SCUBE3-201ENST00000274938 ERVV-2B6SEH9 535 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 DTNBO60941 627 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 CALB1P05937 261 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 CYLC2Q14093 348 aaPredicted RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 LRIG3Q6UXM1 1119 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SLC8A2Q9UPR5 921 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ZRANB2O95218 330 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 A1BGP04217 495 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 PLA2G4BP0C869 781 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 DHX34Q14147 1143 aaKnown RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ANGPTL8Q6UXH0 198 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ATP11CQ8NB49 1132 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 TBCKQ8TEA7 893 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 C10orf88Q9H8K7 445 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SH3GLB2Q9NR46 395 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ASNSD1Q9NWL6 643 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SEPT3Q9UH03 358 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SH2B2O14492 632 aaPredicted RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 TOM1O60784 492 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 PMS1P54277 932 aaKnown RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SLC26A7Q8TE54 656 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SH3GL2Q99962 352 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ADA2Q9NZK5 511 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ADAMTS1Q9UHI8 967 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ARHGAP31Q2M1Z3 1444 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 A2MP01023 1474 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 CLIC2O15247 247 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 MYBL1P10243 752 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 HSPA9P38646 679 aaKnown RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 GYS2P54840 703 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 TBC1D9BQ66K14 1250 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SRLQ86TD4 932 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ZNF579Q8NAF0 562 aaKnown RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SDR42E1Q8WUS8 393 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 STK32BQ9NY57 414 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 STMN3Q9NZ72 180 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 KRT16P08779 473 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 MAP4P27816 1152 aaKnown RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 TRADDQ15628 312 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 RESP18Q5W5W9 173 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 TOGARAM2Q6ZUX3 1019 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 KRT27Q7Z3Y8 459 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SPATA21Q7Z572 469 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ADCK1Q86TW2 530 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 PPCSQ9HAB8 311 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 COBLO75128 1261 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 KRT75O95678 551 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 AGTP01019 485 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 S100A5P33763 92 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 KLC1Q07866 573 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 STAT4Q14765 748 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ADCK5Q3MIX3 580 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 ZBTB38Q8NAP3 1195 aaPredicted RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 OTUB1Q96FW1 271 aaPredicted RBP9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 SNF8Q96H20 258 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 CCDC134Q9H6E4 229 aa9.29□□□□□ -0.92
SCUBE3-201ENST00000274938 WDR47O94967 919 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 BRD2P25440 801 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ELF1P32519 619 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 SKOR1P84550 965 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ABCB5Q2M3G0 1257 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 UNC13DQ70J99 1090 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 RASSF3Q86WH2 238 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PI4K2BQ8TCG2 481 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 COG1Q8WTW3 980 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CYP21A2P08686 494 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CCND1P24385 295 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 TMED10P49755 219 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 ABCE1P61221 599 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 FAM47CQ5HY64 1035 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 TMEM35BQ8NCS4 154 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 NR1H4Q96RI1 486 aaPredicted RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 VPS11Q9H270 941 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 SMG5Q9UPR3 1016 aaKnown RBP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CCDC78A2IDD5 438 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PLCG1P19174 1290 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 CIITAP33076 1130 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 PGM1P36871 562 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 GTF2IP78347 998 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 DDX42Q86XP3 938 aaKnown RBP eCLIP9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 GRAMD1CQ8IYS0 662 aa9.28□□□□□ -0.92
SCUBE3-201ENST00000274938 RAPGEF5Q92565 580 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms