RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ATP8B4Q8TF62 1192 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 CUL5Q93034 780 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 TAS2R14Q9NYV8 317 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 GGA2Q9UJY4 613 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.02□□□□□ -0.17
COL8A1-202ENST00000273342 TRIM33Q9UPN9 1127 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 EP400Q96L91 3159 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 MYH1P12882 1939 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
COL8A1-202ENST00000273342 MED24O75448 989 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 CREB1P16220 341 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 PLCG2P16885 1265 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 CYP11B2P19099 503 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 NAIF1Q69YI7 327 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 PALB2Q86YC2 1186 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ANKRD42Q8N9B4 389 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 RDH13Q8NBN7 331 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 C1orf131Q8NDD1 294 aaKnown RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 SWAP70Q9UH65 585 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 CCDC188H7C350 402 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 MGRN1O60291 552 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 LRRN2O75325 713 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 SNAP25P60880 206 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ARHGEF26Q96DR7 871 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 LZTS2Q9BRK4 669 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ZNF652Q9Y2D9 606 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 KIF1CO43896 1103 aaKnown RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 UBOX5O94941 541 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ANP32DO95626 131 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 TAL1P17542 331 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 PDIA5Q14554 519 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ARSHQ5FYA8 562 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 VPS36Q86VN1 386 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 SPICE1Q8N0Z3 855 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 GDAP1Q8TB36 358 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 NEK9Q8TD19 979 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 CALR3Q96L12 384 aaKnown RBP14.01□□□□□ -0.17
COL8A1-202ENST00000273342 FAM114A2Q9NRY5 505 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 A0A1B0GUL6 1792 aa14.01□□□□□ -0.17
COL8A1-202ENST00000273342 ARAP2Q8WZ64 1704 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 A0A1B0GUA9 196 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 EVI5O60447 810 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 PPP1R11O60927 126 aaPredicted RBP14□□□□□ -0.17
COL8A1-202ENST00000273342 SLC8A1P32418 973 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 KCNJ1P48048 391 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 MARCKSL1P49006 195 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 LNX1Q8TBB1 728 aaPredicted RBP14□□□□□ -0.17
COL8A1-202ENST00000273342 KCNV2Q8TDN2 545 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 AGAP11Q8TF27 550 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 ALG3Q92685 438 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 ZNF317Q96PQ6 595 aaPredicted RBP14□□□□□ -0.17
COL8A1-202ENST00000273342 LRRC27Q9C0I9 530 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 EPB41L4BQ9H329 900 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 PCDHA2Q9Y5H9 948 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 DIAPH2O60879 1101 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 GCNT3O95395 438 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 GNA14O95837 355 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 SF3B3Q15393 1217 aaKnown RBP14□□□□□ -0.17
COL8A1-202ENST00000273342 TRPM8Q7Z2W7 1104 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 CCDC50Q8IVM0 306 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 LMBR1Q8WVP7 490 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 ADAM7Q9H2U9 754 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 KDM4CQ9H3R0 1056 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 SLITRK6Q9H5Y7 841 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 FGFR1OP2Q9NVK5 253 aa14□□□□□ -0.17
COL8A1-202ENST00000273342 ZBTB48P10074 688 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 NFIXQ14938 502 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 LONRF1Q17RB8 773 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 LACTB2Q53H82 288 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 HOOK3Q86VS8 718 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 TLCD1Q96CP7 247 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 RSRC1Q96IZ7 334 aaKnown RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 ERP44Q9BS26 406 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 FAM167BQ9BTA0 163 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 THAP2Q9H0W7 228 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 KCNK9Q9NPC2 374 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 USP17L10C9JJH3 530 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 MPHOSPH10O00566 681 aaKnown RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 MYBL1P10243 752 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 PLS1Q14651 629 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 ZNF746Q6NUN9 644 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 CPNE8Q86YQ8 564 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 JAMLQ86YT9 394 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 ADGRF4Q8IZF3 695 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 FAXDC2Q96IV6 333 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 POP1Q99575 1024 aaKnown RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 SUCLA2Q9P2R7 463 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 PNMA3Q9UL41 463 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 GNPATO15228 680 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 ACSL3O95573 720 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 HOXD13P35453 343 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 DPP8Q6V1X1 898 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 SEPT14Q6ZU15 432 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 NEDD1Q8NHV4 660 aa13.99□□□□□ -0.17
COL8A1-202ENST00000273342 ATXN2LQ8WWM7 1075 aaKnown RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
COL8A1-202ENST00000273342 KRT35Q92764 455 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms