RNA–Protein interactions for RNA: ENST00000269217.10

LAMA3-201, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene LAMA3, Length 5,671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-201ENST00000269217 ATP2C1P98194 919 aaPredicted RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 IQCB1Q15051 598 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TMEM35BQ8NCS4 154 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 KLC2Q9H0B6 622 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ZWILCHQ9H900 591 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ATP6V0A4Q9HBG4 840 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TTC26A0AVF1 554 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 USP27XA6NNY8 438 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 GSG1L2A8MUP6 293 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 HSPA8P11142 646 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF667Q5HYK9 610 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 QTRT2Q9H974 415 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 MRFAP1Q9Y605 127 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 PNPLA6Q8IY17 1366 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 SPECC1L-ADORA2AF8WAN1 911 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TEX33O43247 280 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 GYS2P54840 703 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 MTMR1Q13613 665 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF449Q6P9G9 518 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 PADI6Q6TGC4 694 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 SRRM1Q8IYB3 904 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ABI1Q8IZP0 508 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 MAML1Q92585 1016 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TTC25Q96NG3 672 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TBC1D22BQ9NU19 505 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 CPSF3Q9UKF6 684 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 PACSIN2Q9UNF0 486 aaPredicted RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 SRGAP2CP0DJJ0 459 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ARL13BQ3SXY8 428 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 GPR101Q96P66 508 aaPredicted RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TTC1Q99614 292 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 ZNF341Q9BYN7 854 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 TSPYL2Q9H2G4 693 aaPredicted RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 PNPLA7Q6ZV29 1317 aa10.95□□□□□ -0.66
LAMA3-201ENST00000269217 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
LAMA3-201ENST00000269217 NMT2O60551 498 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RFX1P22670 979 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CRKP46108 304 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 ESRRGP62508 458 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 ART3Q13508 389 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 TFDP2Q14188 446 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 NAALADL2Q58DX5 795 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 AP1ARQ63HQ0 302 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 TADA2BQ86TJ2 420 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 FAF2Q96CS3 445 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CEP95Q96GE4 821 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 EDEM3Q9BZQ6 932 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 MROH7-TTC4A0A0A0MT08 1334 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 WDR64B1ANS9 1081 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 KIF28PB7ZC32 967 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 ORC4O43929 436 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CALB1P05937 261 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CASP2P42575 452 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 KCNB1Q14721 858 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RCSD1Q6JBY9 416 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RPAINQ86UA6 219 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CRLF3Q8IUI8 442 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 MORC4Q8TE76 937 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 HSPH1Q92598 858 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 MASTLQ96GX5 879 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 TRIM55Q9BYV6 548 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 SPATS2LQ9NUQ6 558 aaKnown RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 POTECB2RU33 542 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 ATP5HO75947 161 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 LMNAP02545 664 aaKnown RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 GCLMP48507 274 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 NFRKBQ6P4R8 1299 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 POTEBQ6S5H4 581 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 TBC1D1Q86TI0 1168 aaPredicted RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 SYT2Q8N9I0 419 aaPredicted RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 KIF2CQ99661 725 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 NARFQ9UHQ1 456 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 UNC13BO14795 1591 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L15C9J2P7 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L13C9JLJ4 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L11C9JVI0 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L18D6R9N7 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L22D6RA61 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L17D6RBQ6 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L19D6RCP7 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L20D6RJB6 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 ZBTB24O43167 697 aaPredicted RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 NCF2P19878 526 aaPredicted RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 CHRNA3P32297 505 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 PMS2P54278 862 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 EXOSC10Q01780 885 aaKnown RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L24Q0WX57 530 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RC3H1Q5TC82 1133 aaKnown RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 USP17L6PQ6QN14 398 aa10.94□□□□□ -0.66
LAMA3-201ENST00000269217 RNF168Q8IYW5 571 aaPredicted RBP10.94□□□□□ -0.66
LAMA3-201ENST00000269217 FAM167AQ96KS9 214 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms