RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 PPP1R16BQ96T49 567 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 ATP6V1DQ9Y5K8 247 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 MYH15Q9Y2K3 1946 aa14.24□□□□□ -0.13
SS18-202ENST00000269138 KAT6AQ92794 2004 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 RSPH10B2B2RC85 870 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 VTNP04004 478 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 RSPH10BP0C881 870 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 ACRP10323 421 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 KARSQ15046 597 aaKnown RBP14.23□□□□□ -0.13
SS18-202ENST00000269138 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 AXDND1Q5T1B0 1012 aaPredicted RBP14.23□□□□□ -0.13
SS18-202ENST00000269138 KCNG4Q8TDN1 519 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 TMEM143Q96AN5 459 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 ZNF668Q96K58 619 aaPredicted RBP14.23□□□□□ -0.13
SS18-202ENST00000269138 GDF15Q99988 308 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 DHX33Q9H6R0 707 aaKnown RBP14.23□□□□□ -0.13
SS18-202ENST00000269138 CDHR5Q9HBB8 845 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 GDPD2Q9HCC8 539 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 XPNPEP1Q9NQW7 623 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 DBR1Q9UK59 544 aaKnown RBP14.23□□□□□ -0.13
SS18-202ENST00000269138 PCDHA7Q9UN72 937 aa14.23□□□□□ -0.13
SS18-202ENST00000269138 CUTAO60888 179 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 NBNO60934 754 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 ME1P48163 572 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 POLGP54098 1239 aaPredicted RBP14.22□□□□□ -0.13
SS18-202ENST00000269138 MRPS6P82932 125 aaKnown RBP14.22□□□□□ -0.13
SS18-202ENST00000269138 FPGSQ05932 587 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 MGAT3Q09327 533 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 EMC2Q15006 297 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 FAM26DQ5JW98 314 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 C16orf59Q7L2K0 433 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 DEFB128Q7Z7B8 93 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 RSPH3Q86UC2 560 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 TMEM199Q8N511 208 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 CDK5RAP3Q96JB5 506 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 SPATA32Q96LK8 384 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 PANK2Q9BZ23 570 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 CCSER1Q9C0I3 900 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 BHMT2Q9H2M3 363 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 DNM3Q9UQ16 869 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 CDY2AQ9Y6F7 541 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 KDM3AQ9Y4C1 1321 aa14.22□□□□□ -0.13
SS18-202ENST00000269138 A0A087X0B3 334 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 ARHGEF35A5YM69 484 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 USO1O60763 962 aaKnown RBP14.21□□□□□ -0.13
SS18-202ENST00000269138 CAND2O75155 1236 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 EYA4O95677 639 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 PLCG1P19174 1290 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 RFC5P40937 340 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 SHC4Q6S5L8 630 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 MAEAQ7L5Y9 396 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 NME8Q8N427 588 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 SLC7A3Q8WY07 619 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 CALML4Q96GE6 196 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 CCDC43Q96MW1 224 aaKnown RBP14.21□□□□□ -0.13
SS18-202ENST00000269138 POLD4Q9HCU8 107 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 SUCLA2Q9P2R7 463 aaPredicted RBP14.21□□□□□ -0.13
SS18-202ENST00000269138 AKT3Q9Y243 479 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 PPME1Q9Y570 386 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 LTBP2Q14767 1821 aa14.21□□□□□ -0.13
SS18-202ENST00000269138 SLC26A4O43511 780 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 GPR32O75388 356 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 TMOD1P28289 359 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 PPIGQ13427 754 aaKnown RBP eCLIP14.2□□□□□ -0.142e-6■■■■□ 23.1
SS18-202ENST00000269138 KIZQ2M2Z5 673 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 TCTN1Q2MV58 587 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 KSR1Q8IVT5 923 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 RASSF8Q8NHQ8 419 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 MAP7D2Q96T17 732 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 CELF4Q9BZC1 486 aaKnown RBP14.2□□□□□ -0.14
SS18-202ENST00000269138 NT5C3AQ9H0P0 336 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 IL23AQ9NPF7 189 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 BLOC1S4Q9NUP1 217 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 GINS2Q9Y248 185 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 TRPV2Q9Y5S1 764 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 DGAT1O75907 488 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 SSBP05455 408 aaKnown RBP eCLIP14.2□□□□□ -0.14
SS18-202ENST00000269138 DNM2P50570 870 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 NLRP11P59045 1033 aaKnown RBP14.2□□□□□ -0.14
SS18-202ENST00000269138 TPRNQ4KMQ1 711 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 IER5Q5VY09 327 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 CHRDL2Q6WN34 429 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 PRPF31Q8WWY3 499 aaKnown RBP14.2□□□□□ -0.14
SS18-202ENST00000269138 MTRQ99707 1265 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 JPH2Q9BR39 696 aaPredicted RBP14.2□□□□□ -0.14
SS18-202ENST00000269138 RUSC1Q9BVN2 902 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 UBE2OQ9C0C9 1292 aaKnown RBP14.2□□□□□ -0.14
SS18-202ENST00000269138 ADAMTS10Q9H324 1103 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 ATP6V0A4Q9HBG4 840 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 GPRC5CQ9NQ84 441 aa14.2□□□□□ -0.14
SS18-202ENST00000269138 EVPLQ92817 2033 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 CXCL10P02778 98 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 PLA2G4BP0C869 781 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 GHRP10912 638 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 CYP11B2P19099 503 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 RFC2P35250 354 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 GPC3P51654 580 aa14.19□□□□□ -0.14
SS18-202ENST00000269138 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms