RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 COL1A2P08123 1366 aa11.01□□□□□ -0.65
VPS41-201ENST00000265745 CYP3A7-CYP3A51PA0A087WV96 503 aa11□□□□□ -0.65
VPS41-201ENST00000265745 WDR64B1ANS9 1081 aa11□□□□□ -0.65
VPS41-201ENST00000265745 DEXIO95424 95 aa11□□□□□ -0.65
VPS41-201ENST00000265745 CYP3A7P24462 503 aa11□□□□□ -0.65
VPS41-201ENST00000265745 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
VPS41-201ENST00000265745 NPY5RQ15761 445 aa11□□□□□ -0.65
VPS41-201ENST00000265745 TMEM266Q2M3C6 531 aa11□□□□□ -0.65
VPS41-201ENST00000265745 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
VPS41-201ENST00000265745 NPAS4Q8IUM7 802 aa11□□□□□ -0.65
VPS41-201ENST00000265745 FAM177A1Q8N128 213 aaPredicted RBP11□□□□□ -0.65
VPS41-201ENST00000265745 BANK1Q8NDB2 785 aa11□□□□□ -0.65
VPS41-201ENST00000265745 TBCKQ8TEA7 893 aa11□□□□□ -0.65
VPS41-201ENST00000265745 TMEM40Q8WWA1 233 aa11□□□□□ -0.65
VPS41-201ENST00000265745 SLC5A5Q92911 643 aa11□□□□□ -0.65
VPS41-201ENST00000265745 AIFM3Q96NN9 605 aa11□□□□□ -0.65
VPS41-201ENST00000265745 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
VPS41-201ENST00000265745 DISC1Q9NRI5 854 aa11□□□□□ -0.65
VPS41-201ENST00000265745 TCEAL9Q9UHQ7 104 aa11□□□□□ -0.65
VPS41-201ENST00000265745 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
VPS41-201ENST00000265745 RWDD3Q9Y3V2 267 aa11□□□□□ -0.65
VPS41-201ENST00000265745 SAMM50Q9Y512 469 aa11□□□□□ -0.65
VPS41-201ENST00000265745 NCOR1O75376 2440 aa11□□□□□ -0.65
VPS41-201ENST00000265745 ADGRA3Q8IWK6 1321 aa11□□□□□ -0.65
VPS41-201ENST00000265745 MAGEB2O15479 319 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 ZNF862O60290 1169 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 GAS7O60861 476 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 GPR32O75388 356 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 RPS6KA5O75582 802 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 CTNNB1P35222 781 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 CRYBB1P53674 252 aaPredicted RBP10.99□□□□□ -0.65
VPS41-201ENST00000265745 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
VPS41-201ENST00000265745 STK3Q13188 491 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 COL19A1Q14993 1142 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 KIZQ2M2Z5 673 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 LEXMQ3ZCV2 418 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 Q4G0T1 1027 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 TIGD5Q53EQ6 642 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 TCEAL5Q5H9L2 206 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 GALNT17Q6IS24 598 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 CPLX2Q6PUV4 134 aaKnown RBP10.99□□□□□ -0.65
VPS41-201ENST00000265745 BLIDQ8IZY5 108 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 METTL13Q8N6R0 699 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 DAGLBQ8NCG7 672 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 GJA10Q969M2 543 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 FAM167AQ96KS9 214 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 C11orf84Q9BUA3 381 aaPredicted RBP10.99□□□□□ -0.65
VPS41-201ENST00000265745 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 UBE2ZQ9H832 354 aaPredicted RBP10.99□□□□□ -0.65
VPS41-201ENST00000265745 ERVK-5Q9HDB9 667 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 NRBP2Q9NSY0 501 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 PPP4R2Q9NY27 417 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 ST3GAL5Q9UNP4 418 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 CEP131Q9UPN4 1083 aa10.99□□□□□ -0.65
VPS41-201ENST00000265745 GPR182O15218 404 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 GRM6O15303 877 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 MGEA5O60502 916 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 PSMD10O75832 226 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 VTNP04004 478 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 STAG3L1P0CL83 205 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 KCNA5P22460 613 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 SFNP31947 248 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 JAK3P52333 1124 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 SCRN1Q12765 414 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 LRCH2Q5VUJ6 765 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 ERICH6BQ5W0A0 696 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 B3GNT9Q6UX72 402 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 CMTR2Q8IYT2 770 aaKnown RBP10.98□□□□□ -0.65
VPS41-201ENST00000265745 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.98□□□□□ -0.65
VPS41-201ENST00000265745 MBOAT7Q96N66 472 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 ADAM2Q99965 735 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 LMAN2LQ9H0V9 348 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 UNC45AQ9H3U1 944 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
VPS41-201ENST00000265745 RGS18Q9NS28 235 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 TPCN1Q9ULQ1 816 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 MRPL42Q9Y6G3 142 aaKnown RBP10.98□□□□□ -0.65
VPS41-201ENST00000265745 GBF1Q92538 1859 aa10.98□□□□□ -0.65
VPS41-201ENST00000265745 C9IYK1 514 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 CHMP2AO43633 222 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 PFKFB2O60825 505 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 TDP2O95551 362 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 OATP04181 439 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 SARSP49591 514 aaKnown RBP10.97□□□□□ -0.65
VPS41-201ENST00000265745 CLCN3P51790 818 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 ANAPC15P60006 121 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 FAM189BP81408 668 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 PRKCEQ02156 737 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 PTGDRQ13258 359 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 CAMK1Q14012 370 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 UGCGQ16739 394 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 EFCAB12Q6NXP0 572 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 MOXD1Q6UVY6 613 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 SLC24A5Q71RS6 500 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 ZNF710Q8N1W2 664 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 LINC01465Q8N7H1 131 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 RDM1Q8NG50 284 aa10.97□□□□□ -0.65
VPS41-201ENST00000265745 ETNPPLQ8TBG4 499 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms