RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 FAM213AQ9BRX8 229 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 RNF17Q9BXT8 1623 aaKnown RBP12.98□□□□□ -0.33
COL8A1-201ENST00000261037 MFAP3LO75121 409 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 KITP10721 976 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 GCLMP48507 274 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 PRELPP51888 382 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 GYS2P54840 703 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 RWDD2BP57060 319 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 NEK9Q8TD19 979 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 PLAAQ9Y263 795 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 CUL4AQ13619 759 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 TOB2Q14106 344 aaPredicted RBP12.98□□□□□ -0.33
COL8A1-201ENST00000261037 TMEM179Q6ZVK1 233 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 TRMT2AQ8IZ69 625 aaKnown RBP12.98□□□□□ -0.33
COL8A1-201ENST00000261037 PANX2Q96RD6 677 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 STRBPQ96SI9 672 aaKnown RBP12.98□□□□□ -0.33
COL8A1-201ENST00000261037 ANAPC7Q9UJX3 599 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 ZBBXA8MT70 800 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 CLCN6P51797 869 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 NECTIN1Q15223 517 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 PPP4R4Q6NUP7 873 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 HIPK4Q8NE63 616 aa12.98□□□□□ -0.33
COL8A1-201ENST00000261037 PDCD6IPQ8WUM4 868 aaKnown RBP12.98□□□□□ -0.33
COL8A1-201ENST00000261037 LRRC63Q05C16 580 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ALKBH5Q6P6C2 394 aaKnown RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CENPUQ71F23 418 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TEX2Q8IWB9 1127 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CCHCR1Q8TD31 782 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TTI1O43156 1089 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CREB3O43889 395 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 LUC7L3O95232 432 aaKnown RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 KPNA2P52292 529 aaKnown RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 RAD54LQ92698 747 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TTC17Q96AE7 1141 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 KLHL29Q96CT2 875 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CYP2E1P05181 493 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 NR1D1P20393 614 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 EEF1B2P24534 225 aaKnown RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SURF1Q15526 300 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SNRNP48Q6IEG0 339 aaKnown RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SCN4BQ8IWT1 228 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 EFCAB13Q8IY85 973 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 RTKN2Q8IZC4 609 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SH3GLB2Q9NR46 395 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 HEY1Q9Y5J3 304 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZHX2Q9Y6X8 837 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ABCA9Q8IUA7 1624 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 KRT10P13645 584 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CYTH2Q99418 400 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TMEM47Q9BQJ4 181 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SUCLA2Q9P2R7 463 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
COL8A1-201ENST00000261037 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 IQANK1A0A1B0GTG1 560 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZBTB5O15062 677 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ABCD1P33897 745 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 JAK3P52333 1124 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ARHGEF6Q15052 776 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF699Q32M78 642 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TBC1D9BQ66K14 1250 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 SLFN12LQ6IEE8 588 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 FBXL13Q8NEE6 735 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
COL8A1-201ENST00000261037 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 NCK2O43639 380 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 HSPA4LO95757 839 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 TMEM270Q6UE05 265 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 CNOT8Q9UFF9 292 aaKnown RBP12.96□□□□□ -0.33
COL8A1-201ENST00000261037 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 LRRC53A6NM62 1247 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 POTECB2RU33 542 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 CA4P22748 312 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 OCRLQ01968 901 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 PADI6Q6TGC4 694 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 FRA10AC1Q70Z53 315 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 RHPN2Q8IUC4 686 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 CCDC138Q96M89 665 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 WRNIP1Q96S55 665 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 SNX24Q9Y343 169 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 CDC42BPGQ6DT37 1551 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 HADHAP40939 763 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 LIFRP42702 1097 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 GPC3P51654 580 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 COASYQ13057 564 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 ANO4Q32M45 955 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 KLC3Q6P597 504 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 BRIP1Q9BX63 1249 aa12.96□□□□□ -0.33
COL8A1-201ENST00000261037 A0A0G2JND7 137 aa12.96□□□□□ -0.34
COL8A1-201ENST00000261037 NR3C1P04150 777 aa12.96□□□□□ -0.34
COL8A1-201ENST00000261037 FOXP4Q8IVH2 680 aaPredicted RBP12.96□□□□□ -0.34
COL8A1-201ENST00000261037 PRDM5Q9NQX1 630 aaPredicted RBP12.96□□□□□ -0.34
COL8A1-201ENST00000261037 ADAM22Q9P0K1 906 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms