RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 AARSP49588 968 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNF38-201ENST00000259605 GEMIN4P57678 1058 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 RNASE9P60153 205 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 CDK17Q00537 523 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 UBXN1Q04323 297 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 UBE3CQ15386 1083 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MGAT5BQ3V5L5 792 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MFSD4BQ5TF39 518 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 GBP6Q6ZN66 633 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 TRIM42Q8IWZ5 723 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 WDR48Q8TAF3 677 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PDCD6IPQ8WUM4 868 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 FAM151AQ8WW52 585 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 SEPT1Q8WYJ6 367 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 KCNS3Q9BQ31 491 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 USP26Q9BXU7 913 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 PPP1R12CQ9BZL4 782 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 FANCEQ9HB96 536 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 MRPL47Q9HD33 250 aaKnown RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.34□□□□□ -1.71
RNF38-201ENST00000259605 TRPM5Q9NZQ8 1165 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 ARMCX3Q9UH62 379 aaPredicted RBP4.34□□□□□ -1.71
RNF38-201ENST00000259605 IRS2Q9Y4H2 1338 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 A2ML1A8K2U0 1454 aa4.34□□□□□ -1.71
RNF38-201ENST00000259605 H7C0C1 242 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 ZNF263O14978 683 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 MCAMP43121 646 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 ATP5OP48047 213 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 NCKAP1LP55160 1127 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 DEFB128Q7Z7B8 93 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 DNAAF3Q8N9W5 541 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 SPC24Q8NBT2 197 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 LRRC37BQ96QE4 947 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 DEFB129Q9H1M3 183 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 RABEP2Q9H5N1 569 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 CD209Q9NNX6 404 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 ATG3Q9NT62 314 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 NXF1Q9UBU9 619 aaKnown RBP4.34□□□□□ -1.72
RNF38-201ENST00000259605 VPS51Q9UID3 782 aa4.34□□□□□ -1.72
RNF38-201ENST00000259605 ZNF536O15090 1300 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 NDUFB5O43674 189 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 DNAJC6O75061 913 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 COBLO75128 1261 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 BMP10O95393 424 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 FGBP02675 491 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TUBB4AP04350 444 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ALDH2P05091 517 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HIST1H2AGP0C0S8 130 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 SLC2A3P11169 496 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HIST1H2ADP20671 130 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HPDP32754 393 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 SLC11A2P49281 568 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 MRE11P49959 708 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 THOP1P52888 689 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 FAM47AQ5JRC9 791 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 NOL9Q5SY16 702 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 MAP3K21Q5TCX8 1036 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TTC19Q6DKK2 380 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 ZNF280DQ6N043 979 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SCYL3Q8IZE3 742 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CSGALNACT2Q8N6G5 542 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CEP120Q8N960 986 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CCDC127Q96BQ5 260 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ALKBH8Q96BT7 664 aaKnown RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 HIST1H2AHQ96KK5 128 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 OSBPL9Q96SU4 736 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GPR20Q99678 358 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SEPT5Q99719 369 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 HIST1H2AJQ99878 128 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 H2AFJQ9BTM1 129 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 WDR41Q9HAD4 459 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ERAP1Q9NZ08 941 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 DSEQ9UL01 958 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PCDHGB4Q9UN71 923 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 NDUFB9Q9Y6M9 179 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GAKO14976 1311 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SNTNA6NMZ2 147 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TTI1O43156 1089 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 TUBBP07437 444 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 JAK1P23458 1154 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 PNPLA4P41247 253 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 IRX5P78411 483 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 SLFN5Q08AF3 891 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 POLD3Q15054 466 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 KDELC2Q7Z4H8 507 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ADCK2Q7Z695 626 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 IFNLR1Q8IU57 520 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 C7orf61Q8IZ16 206 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ANKRD44Q8N8A2 993 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SLC44A5Q8NCS7 719 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 KIF18AQ8NI77 898 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SUN3Q8TAQ9 357 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CAPSLQ8WWF8 208 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 CCDC3Q9BQI4 270 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 KDM4CQ9H3R0 1056 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 SUDS3Q9H7L9 328 aaPredicted RBP4.33□□□□□ -1.72
RNF38-201ENST00000259605 NEUROD4Q9HD90 331 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 GPR108Q9NPR9 543 aa4.33□□□□□ -1.72
RNF38-201ENST00000259605 ABCF3Q9NUQ8 709 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms