RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 TNFAIP8L3Q5GJ75 292 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 KIAA1755Q5JYT7 1200 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 CARD9Q9H257 536 aa12.47□□□□□ -0.41
TROAP-201ENST00000257909 A6NHS1 94 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 KLRF2D3W0D1 207 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 CETN3O15182 167 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 KRT16P08779 473 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 PLTPP55058 493 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 RWDD2BP57060 319 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 INHBEP58166 350 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 LMNB2Q03252 620 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 SF3A3Q12874 501 aaKnown RBP eCLIP12.46□□□□□ -0.419e-8■■■■■ 37.1
TROAP-201ENST00000257909 ADAM9Q13443 819 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 EDRF1Q3B7T1 1238 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 CHADLQ6NUI6 762 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 ERICH1Q86X53 443 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 CCDC65Q8IXS2 484 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.41
TROAP-201ENST00000257909 MTFR1LQ9H019 292 aa12.46□□□□□ -0.41
TROAP-201ENST00000257909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.46□□□□□ -0.41
TROAP-201ENST00000257909 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
TROAP-201ENST00000257909 EME2A4GXA9 379 aaPredicted RBP12.46□□□□□ -0.42
TROAP-201ENST00000257909 GFPT2O94808 682 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 SKIV2L2P42285 1042 aaKnown RBP12.46□□□□□ -0.42
TROAP-201ENST00000257909 IFNAR2P48551 515 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 MECOMQ03112 1051 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 ASRGL1Q7L266 308 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 TBC1D16Q8TBP0 767 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 RNF217Q8TC41 542 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 DYDC1Q8WWB3 177 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 PRCCQ92733 491 aaPredicted RBP12.46□□□□□ -0.42
TROAP-201ENST00000257909 TRIM7Q9C029 511 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 RXFP1Q9HBX9 757 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 MCM9Q9NXL9 1143 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 ARL2BPQ9Y2Y0 163 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 CD2APQ9Y5K6 639 aa12.46□□□□□ -0.42
TROAP-201ENST00000257909 SMIM23A6NLE4 172 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 KIAA0391O15091 583 aaKnown RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 AHCYL1O43865 530 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 FESP07332 822 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 EXOC3L4Q17RC7 722 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 MFSD5Q6N075 450 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 JAMLQ86YT9 394 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 APLFQ8IW19 511 aaPredicted RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 FBXO25Q8TCJ0 367 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 KCTD10Q9H3F6 313 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 ETAA1Q9NY74 926 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ZFATQ9P243 1243 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 SEC63Q9UGP8 760 aaKnown RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 HDAC9Q9UKV0 1011 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 RPTORQ8N122 1335 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 POTEMA6NI47 508 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 RASGRF2O14827 1237 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 SNUPNO95149 360 aaKnown RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 GJB6O95452 261 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 AFPP02771 609 aaKnown RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 TSPY3P0CV98 308 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 TSPY8P0CW00 308 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ACTN1P12814 892 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 SLC9A1P19634 815 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 MAPK7Q13164 816 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 DPY19L2P1Q6NXN4 242 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ZDHHC24Q6UX98 284 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 KCNK18Q7Z418 384 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 FRMD5Q7Z6J6 570 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 NELFCDQ8IXH7 590 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 SPICE1Q8N0Z3 855 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 NAF1Q96HR8 494 aaKnown RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 RAB3IPQ96QF0 476 aaPredicted RBP12.45□□□□□ -0.42
TROAP-201ENST00000257909 ADAM22Q9P0K1 906 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 SCN7AQ01118 1682 aa12.45□□□□□ -0.42
TROAP-201ENST00000257909 ENO4A6NNW6 628 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 PODXLO00592 558 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 ABLIM1O14639 778 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 DDX3YO15523 660 aaKnown RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 EVI5O60447 810 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 NEFHP12036 1026 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 PECAM1P16284 738 aaPredicted RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 SMARCA1P28370 1054 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 PRPF4BQ13523 1007 aaKnown RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 TAF11Q15544 211 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 SPDYE1Q8NFV5 336 aaPredicted RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 RUNDC3BQ96NL0 473 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 CCDC113Q9H0I3 377 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 MKNK2Q9HBH9 465 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 CPSF2Q9P2I0 782 aaKnown RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 BIN2Q9UBW5 565 aaPredicted RBP12.44□□□□□ -0.42
TROAP-201ENST00000257909 SNX24Q9Y343 169 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 NR2E1Q9Y466 385 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 BCL9O00512 1426 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 E7ENQ6 273 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 LINGO3P0C6S8 592 aa12.44□□□□□ -0.42
TROAP-201ENST00000257909 CCNB1P14635 433 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 242.5 ms