RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 UTRNP46939 3433 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 LRRC37AA6NMS7 1700 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 LMNB1P20700 586 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 MCM3P25205 808 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 RNASE9P60153 205 aaKnown RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 PTPROQ16827 1216 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 CAPRIN2Q6IMN6 1127 aaKnown RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 SLC30A9Q6PML9 568 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 AENQ8WTP8 325 aaKnown RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 KCNMB3Q9NPA1 279 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 BMP2KQ9NSY1 1161 aaPredicted RBP12.32□□□□□ -0.44
PDE6B-201ENST00000255622 EMILIN3Q9NT22 766 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 CEP72Q9P209 647 aa12.32□□□□□ -0.44
PDE6B-201ENST00000255622 ZSCAN5CA6NGD5 496 aaPredicted RBP12.31□□□□□ -0.44
PDE6B-201ENST00000255622 ZEB2O60315 1214 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 HLA-DOAP06340 250 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
PDE6B-201ENST00000255622 ADAM9Q13443 819 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 SLC9C1Q4G0N8 1177 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 TRIM59Q8IWR1 403 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 CCDC65Q8IXS2 484 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 MMGT1Q8N4V1 131 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 A0A087X0T9 212 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 FAM170AA1A519 330 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 MEIS2O14770 477 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 PJA2O43164 708 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 PALMO75781 387 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 GDF11O95390 407 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 FAM228BP0C875 321 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 KLRC1P26715 233 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 SLC12A3P55017 1021 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 HYIQ5T013 277 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 HAUS3Q68CZ6 603 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 IQCEQ6IPM2 695 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 NOX5Q96PH1 765 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 NT5C3AQ9H0P0 336 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 RABL2AQ9UBK7 228 aaPredicted RBP12.31□□□□□ -0.44
PDE6B-201ENST00000255622 CTDP1Q9Y5B0 961 aaPredicted RBP12.31□□□□□ -0.44
PDE6B-201ENST00000255622 KDM3AQ9Y4C1 1321 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 LGR5O75473 907 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 ALDH1B1P30837 517 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 CYP4A11Q02928 519 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 SEPT2Q15019 361 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 MICALCLQ6ZW33 695 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 OGFOD1Q8N543 542 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 KCTD17Q8N5Z5 321 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 CYP2W1Q8TAV3 490 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 IKZF4Q9H2S9 585 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 GOLPH3Q9H4A6 298 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 FAM184BQ9ULE4 1060 aa12.31□□□□□ -0.44
PDE6B-201ENST00000255622 GREB1LQ9C091 1923 aaPredicted RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 ESYT3A0FGR9 886 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 RSPH10B2B2RC85 870 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 G3V3G9 751 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SERPING1P05155 500 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 RSPH10BP0C881 870 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 NR2F2P24468 414 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 HOXA13P31271 388 aaPredicted RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 CRKP46108 304 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SPIRE1Q08AE8 756 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 DCAF8Q5TAQ9 597 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SLFN13Q68D06 897 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SIAH1Q8IUQ4 282 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 AFAP1L1Q8TED9 768 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SSU72P8A0A1W2PR75 194 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SPDYE3A6NKU9 549 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 HOXD13P35453 343 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 EPS15P42566 896 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 KBTBD12Q3ZCT8 623 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 SH3BP5LQ7L8J4 393 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 ZNF572Q7Z3I7 529 aaPredicted RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 TSEN2Q8NCE0 465 aaKnown RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
PDE6B-201ENST00000255622 ANKRD31Q8N7Z5 1873 aa12.3□□□□□ -0.44
PDE6B-201ENST00000255622 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 TRIM37O94972 964 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 MYBP10242 640 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 PRLRP16471 622 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 SLC9A1P19634 815 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 SFR1Q86XK3 245 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 ETNPPLQ8TBG4 499 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 REEP2Q9BRK0 252 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
PDE6B-201ENST00000255622 DDX20Q9UHI6 824 aaKnown RBP12.29□□□□□ -0.44
PDE6B-201ENST00000255622 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 QSER1Q2KHR3 1735 aa12.29□□□□□ -0.44
PDE6B-201ENST00000255622 A0A1B0GVG6 124 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms