RNA–Protein interactions for RNA: ENST00000255448.8

DCLK1-201, Transcript of doublecortin like kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK1, Length 5,703 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK1-201ENST00000255448 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 RMI1Q9H9A7 625 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 SEC31BQ9NQW1 1179 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 RPAP1Q9BWH6 1393 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 CPSF1Q10570 1443 aaKnown RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 KRT8P05787 483 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 ADRA2BP18089 450 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 FAM26FQ5R3K3 315 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 CRLF3Q8IUI8 442 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 DCLK2Q8N568 766 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 CARD9Q9H257 536 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 TMPRSS15P98073 1019 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 CEP55Q53EZ4 464 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 ATG16L1Q676U5 607 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 APLFQ8IW19 511 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 ZNF280CQ8ND82 737 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 FOXP1Q9H334 677 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 ZNF189O75820 626 aaPredicted RBP11.73□□□□□ -0.53
DCLK1-201ENST00000255448 TNNC2P02585 160 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 DAB2P98082 770 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 APOA5Q6Q788 366 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 METTL13Q8N6R0 699 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 PAGE5Q96GU1 130 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 PNKPQ96T60 521 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 THAP9Q9H5L6 903 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 PDP2Q9P2J9 529 aa11.73□□□□□ -0.53
DCLK1-201ENST00000255448 KCNA4P22459 653 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 GRAMD1AQ96CP6 724 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 CCDC124Q96CT7 223 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 RMDN2Q96LZ7 410 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ZIM3Q96PE6 472 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 UPF3AQ9H1J1 476 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 GOLGA8QA0A0J9YX86 632 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 GOLGA8OA6NCC3 632 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 GOLGA8NF8WBI6 632 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 WDR46O15213 610 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 CASP2P42575 452 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 POLA2Q14181 598 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 FAM47CQ5HY64 1035 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 CASP10Q92851 521 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 CYP4F11Q9HBI6 524 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 SMYD2Q9NRG4 433 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ATP11BQ9Y2G3 1177 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 K7ENM7 598 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 PODXLO00592 558 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 TPD52L2O43399 206 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 TMCC1O94876 653 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ZNF589Q86UQ0 364 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 OR2W6PQ8NHA6 318 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ATP6V0A1Q93050 837 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 MCM8Q9UJA3 840 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 SOS2Q07890 1332 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 SERPINI2O75830 405 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 DMP1Q13316 513 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 KCNB1Q14721 858 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 AOC3Q16853 763 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 BZW1Q7L1Q6 419 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 TTLL6Q8N841 843 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ARL10Q8N8L6 244 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 CLMNQ96JQ2 1002 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 AK8Q96MA6 479 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 COA1Q9GZY4 146 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ING2Q9H160 280 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
DCLK1-201ENST00000255448 ADD3Q9UEY8 706 aaKnown RBP11.72□□□□□ -0.53
DCLK1-201ENST00000255448 KITP10721 976 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 SCTRP47872 440 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 LRRC41Q15345 812 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 WDR75Q8IWA0 830 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 PPM1KQ8N3J5 372 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 CDKL2Q92772 493 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 NDST4Q9H3R1 872 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 C1orf112Q9NSG2 853 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 STRIP2Q9ULQ0 834 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 ESYT2A0FGR8 921 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 MAGEA13PA6NCF6 341 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 OSBPP22059 807 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 ALKBH5Q6P6C2 394 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 MASTLQ96GX5 879 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 TLR7Q9NYK1 1049 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 CLRN2A0PK11 232 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 PALM3A6NDB9 673 aaPredicted RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 FMNL1O95466 1100 aaPredicted RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 CDC25AP30304 524 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 YARSP54577 528 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 PTPN12Q05209 780 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 AP1B1Q10567 949 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 BYSLQ13895 437 aaKnown RBP11.71□□□□□ -0.53
DCLK1-201ENST00000255448 CNGA3Q16281 694 aa11.71□□□□□ -0.53
DCLK1-201ENST00000255448 C10orf76Q5T2E6 689 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms