RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 FXR1P51114 621 aaKnown RBP eCLIP20.81■□□□□ 0.92
TRIM47-201ENST00000254816 TBC1D8BQ0IIM8 1120 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 FAM102BQ5T8I3 360 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 OTUD6AQ7L8S5 288 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 PDGFCQ9NRA1 345 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 KCND1Q9NSA2 647 aa20.81■□□□□ 0.92
TRIM47-201ENST00000254816 DDX41Q9UJV9 622 aaKnown RBP20.81■□□□□ 0.92
TRIM47-201ENST00000254816 K7ENM7 598 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 PDXKO00764 312 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 EIF3DO15371 548 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 TGFB1I1O43294 461 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 NEDD9Q14511 834 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 NAA30Q147X3 362 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 EDRF1Q3B7T1 1238 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 VWA3BQ502W6 1294 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 PPP4R3CPQ6ZMV5 832 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 CEP63Q96MT8 703 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 TMX1Q9H3N1 280 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 TYW1Q9NV66 732 aaKnown RBP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 CALUO43852 315 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 TGFB3P10600 412 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 MAN2A1Q16706 1144 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 TMEM139Q8IV31 216 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 ZC3H3Q8IXZ2 948 aaKnown RBP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 LARSQ9P2J5 1176 aaKnown RBP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 CPA4Q9UI42 421 aa20.8■□□□□ 0.92
TRIM47-201ENST00000254816 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM47-201ENST00000254816 DOCK3Q8IZD9 2030 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 IGF2BP3O00425 579 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIM47-201ENST00000254816 DKC1O60832 514 aaKnown RBP eCLIP20.79■□□□□ 0.92
TRIM47-201ENST00000254816 ZNF792Q3KQV3 632 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 MTERF2Q49AM1 385 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 ARMCX2Q7L311 632 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 SAPCD2Q86UD0 394 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 COPS5Q92905 334 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 PCYT2Q99447 389 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 NDST4Q9H3R1 872 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 MAFBQ9Y5Q3 323 aaPredicted RBP20.79■□□□□ 0.92
TRIM47-201ENST00000254816 IVNS1ABPQ9Y6Y0 642 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 CETN3O15182 167 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 PLS3P13797 630 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 PEX3P56589 373 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 NCBP1Q09161 790 aaKnown RBP20.79■□□□□ 0.92
TRIM47-201ENST00000254816 SYCP1Q15431 976 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 GPR142Q7Z601 462 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 MORC4Q8TE76 937 aa20.79■□□□□ 0.92
TRIM47-201ENST00000254816 A0A1W2PQC6 194 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 NRDCO43847 1150 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 MFAP3LO75121 409 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 NR3C1P04150 777 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 METTL7BQ6UX53 244 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 CCDC155Q8N6L0 562 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 DRC1Q96MC2 740 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 CYP26B1Q9NR63 512 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 PPP1R37O75864 691 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 TCF7P36402 384 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-201ENST00000254816 HSDL1Q3SXM5 330 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 BAG1Q99933 345 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-201ENST00000254816 STRA6Q9BX79 667 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 PCDHB13Q9Y5F0 798 aa20.78■□□□□ 0.92
TRIM47-201ENST00000254816 IGKV6D-21A0A0A0MT36 114 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 ASB14A6NK59 587 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 RASSF10A6NK89 507 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 CASP4P49662 377 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 FAM110CQ1W6H9 321 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 XKR3Q5GH77 459 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 FKBP15Q5T1M5 1219 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 RGMBQ6NW40 437 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 ANKRD7Q92527 254 aa20.77■□□□□ 0.92
TRIM47-201ENST00000254816 PCMTD1Q96MG8 357 aaPredicted RBP20.77■□□□□ 0.92
TRIM47-201ENST00000254816 SLC16A4O15374 487 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 OATP04181 439 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 TXNP10599 105 aaKnown RBP20.76■□□□□ 0.91
TRIM47-201ENST00000254816 CELF3Q5SZQ8 465 aaKnown RBP20.76■□□□□ 0.91
TRIM47-201ENST00000254816 STXBP4Q6ZWJ1 553 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 KIFC3Q9BVG8 833 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 TIPINQ9BVW5 301 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 XPNPEP1Q9NQW7 623 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 AKAP3O75969 853 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 GNA14O95837 355 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 CCDC62Q6P9F0 684 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 KIF18AQ8NI77 898 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 SEPT1Q8WYJ6 367 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 UBE4BO95155 1302 aa20.76■□□□□ 0.91
TRIM47-201ENST00000254816 TTC26A0AVF1 554 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 STRNO43815 780 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 TPM1P09493 284 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 GJC2Q5T442 439 aaPredicted RBP20.75■□□□□ 0.91
TRIM47-201ENST00000254816 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 HAUS6Q7Z4H7 955 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 DPP9Q86TI2 863 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 TRIM59Q8IWR1 403 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 DHX37Q8IY37 1157 aaKnown RBP20.75■□□□□ 0.91
TRIM47-201ENST00000254816 SYCP3Q8IZU3 236 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 PDLIM7Q9NR12 457 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 PASKQ96RG2 1323 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
TRIM47-201ENST00000254816 TISP43B9A030 160 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms