RNA–Protein interactions for RNA: ENST00000253807.2

PCDHAC1-201, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHAC1, Length 5,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-201ENST00000253807 NR1D1P20393 614 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 FMR1Q06787 632 aaKnown RBP eCLIP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 KIF22Q14807 665 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 SNRNP48Q6IEG0 339 aaKnown RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 PHLDB2Q86SQ0 1253 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 FAM193BQ96PV7 902 aaPredicted RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 KCNF1Q9H3M0 494 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 CNTNAP4Q9C0A0 1308 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 PDXKO00764 312 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 SART1O43290 800 aaKnown RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 CCZ1BP86790 482 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 LLGL1Q15334 1064 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 SENP2Q9HC62 589 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 ATF5Q9Y2D1 282 aaPredicted RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 MRFAP1Q9Y605 127 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 ZHX2Q9Y6X8 837 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 CTNND1O60716 968 aaKnown RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 VAMP7P51809 220 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 PSMC5P62195 406 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 ERICH1Q86X53 443 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 LXNQ9BS40 222 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 TUFT1Q9NNX1 390 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 CNOT8Q9UFF9 292 aaKnown RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 SLC16A4O15374 487 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 NOL3O60936 208 aaKnown RBP13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 RASA1P20936 1047 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 OSTNP61366 133 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 OR6B2Q6IFH4 312 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 PDXDC1Q6P996 788 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 HHIPL2Q6UWX4 724 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 LCMT1Q9UIC8 334 aa13.37□□□□□ -0.27
PCDHAC1-201ENST00000253807 GRID2IPA4D2P6 1211 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 ARL4AP40617 200 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CLNS1AP54105 237 aaKnown RBP13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 IFT88Q13099 833 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 PRPSAP1Q14558 356 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 C6orf118Q5T5N4 469 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 KCTD6Q8NC69 237 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 ENGASEQ8NFI3 743 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CALN1Q9BXU9 219 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 VCXQ9H320 206 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 ADAM22Q9P0K1 906 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 NOVA2Q9UNW9 492 aaKnown RBP13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CNTNAP5Q8WYK1 1306 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 SYNJ2BP-COX16A0A087WUM0 186 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CLDN3O15551 220 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 HIP1RO75146 1068 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 MSH2P43246 934 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CEP55Q53EZ4 464 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 TRIM42Q8IWZ5 723 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 COX16Q9P0S2 106 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 A0A0G2JLW4 131 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 DENND3A2RUS2 1198 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 TBX3O15119 743 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 PRPSAP2O60256 369 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 CCDC38Q502W7 563 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 MAP3K21Q5TCX8 1036 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 NLRP4Q96MN2 994 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 INTS2Q9H0H0 1204 aaKnown RBP13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 STXBP3O00186 592 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 ADCY2Q08462 1091 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 DRAP1Q14919 205 aaPredicted RBP13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 ZNF667Q5HYK9 610 aa13.36□□□□□ -0.27
PCDHAC1-201ENST00000253807 PDE1BQ01064 536 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 RNASELQ05823 741 aaKnown RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 NR1I3Q14994 352 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 MAPK6Q16659 721 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 E4F1Q66K89 784 aaPredicted RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 DARS2Q6PI48 645 aaKnown RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 RPUSD2Q8IZ73 545 aaKnown RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 TMEM35BQ8NCS4 154 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 SLC38A10Q9HBR0 1119 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 DYNLT1P63172 113 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 SPP2Q13103 211 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 PFDN4Q9NQP4 134 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 ANAPC7Q9UJX3 599 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 ENTPD3O75355 529 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 SRGNP10124 158 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 PHLDB3Q6NSJ2 640 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 LDHDQ86WU2 507 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 C7orf31Q8N865 590 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 PPP1R12CQ9BZL4 782 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 RRP15Q9Y3B9 282 aaKnown RBP13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 SLC8A1P32418 973 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 PPP2R5CQ13362 524 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 KRT39Q6A163 491 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 POLD4Q9HCU8 107 aa13.35□□□□□ -0.27
PCDHAC1-201ENST00000253807 CPP00450 1065 aa13.34□□□□□ -0.27
PCDHAC1-201ENST00000253807 BASP1P80723 227 aaKnown RBP13.34□□□□□ -0.27
PCDHAC1-201ENST00000253807 TMED2Q15363 201 aa13.34□□□□□ -0.27
PCDHAC1-201ENST00000253807 SCARA5Q6ZMJ2 495 aa13.34□□□□□ -0.27
PCDHAC1-201ENST00000253807 USP49Q70CQ1 688 aa13.34□□□□□ -0.27
PCDHAC1-201ENST00000253807 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms