RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 KLHL23Q8NBE8 558 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 SLC7A14Q8TBB6 771 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 LEO1Q8WVC0 666 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 WNT8BQ93098 351 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 KAZALD1Q96I82 304 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 WNK4Q96J92 1243 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 SMAD5Q99717 465 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 KLHL25Q9H0H3 589 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 OSBPL5Q9H0X9 879 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 CRIM1Q9NZV1 1036 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 ZNF70Q9UC06 446 aaPredicted RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 HERC5Q9UII4 1024 aaKnown RBP4.27□□□□□ -1.73
RBM39-201ENST00000253363 ADAM30Q9UKF2 790 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 INTUQ9ULD6 942 aa4.27□□□□□ -1.73
RBM39-201ENST00000253363 DDX60LQ5H9U9 1706 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 MROH7-TTC4A0A0A0MT08 1334 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ANKRD34BA5PLL1 514 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 IFRD1O00458 451 aaPredicted RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 TIMM44O43615 452 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 HSP90AA1P07900 732 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 C6orf222P0C671 652 aaPredicted RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 CETPP11597 493 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 NID1P14543 1247 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 GBP1P32455 592 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 HNRNPUQ00839 825 aaKnown RBP eCLIP4.26□□□□□ -1.73
RBM39-201ENST00000253363 EXOSC10Q01780 885 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 PPATQ06203 517 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 POU5F1BQ06416 359 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 LONRF2Q1L5Z9 754 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 EPHA10Q5JZY3 1008 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 C1QTNF12Q5T7M4 302 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 HEATR6Q6AI08 1181 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 ZSCAN25Q6NSZ9 544 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ATG9AQ7Z3C6 839 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 SKAP1Q86WV1 359 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ERO1BQ86YB8 467 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 DZIP1Q86YF9 867 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 MRPL41Q8IXM3 137 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 DRC7Q8IY82 874 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 GOLGA6L1Q8N7Z2 621 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 RIN3Q8TB24 985 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 MKRN2Q9H000 416 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 CCDC8Q9H0W5 538 aaPredicted RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 AS3MTQ9HBK9 375 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 CASS4Q9NQ75 786 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 FAM105AQ9NUU6 356 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ZNF451Q9Y4E5 1061 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 LRRFIP2Q9Y608 721 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 SSC5DA1L4H1 1573 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 DOCK1Q14185 1865 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 LOC285556D6RIA3 1793 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ADM5C9JUS6 153 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 AGRPO00253 132 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 CXCL11O14625 94 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 FANCGO15287 622 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 PRODHO43272 600 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 SRGAP3O43295 1099 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 CLEC3AO75596 197 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 SLFN14P0C7P3 912 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 FAM200BP0CF97 657 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 MAP2K3P46734 347 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ATP8B2P98198 1209 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 SNW1Q13573 536 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 SIM2Q14190 667 aaPredicted RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 KIF22Q14807 665 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 PKN3Q6P5Z2 889 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 CCDC174Q6PII3 467 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 FASTKD5Q7L8L6 764 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 ANKRD23Q86SG2 305 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 CCDC144CPQ8IYA2 1237 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 BTN2A2Q8WVV5 523 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 OSBP2Q969R2 916 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ISL2Q96A47 359 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 KIF1BPQ96EK5 621 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 AARSD1Q9BTE6 412 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 DEFB129Q9H1M3 183 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 EPN3Q9H201 632 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ZNF112Q9UJU3 913 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 ISY1Q9ULR0 285 aaKnown RBP4.26□□□□□ -1.73
RBM39-201ENST00000253363 SYNPO2Q9UMS6 1093 aa4.26□□□□□ -1.73
RBM39-201ENST00000253363 OTOFQ9HC10 1997 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 FOCADQ5VW36 1801 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 TRAV20A0A0B4J274 112 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 FOXN1O15353 648 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 KPNA6O60684 536 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 FKTNO75072 461 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 DNAJC8O75937 253 aaPredicted RBP4.25□□□□□ -1.73
RBM39-201ENST00000253363 TGFB3P10600 412 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 PABPC1P11940 636 aaKnown RBP4.25□□□□□ -1.73
RBM39-201ENST00000253363 MAN1A1P33908 653 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 SNAPC2Q13487 334 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 MTMR1Q13613 665 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 PCBP1Q15365 356 aaKnown RBP eCLIP4.25□□□□□ -1.73
RBM39-201ENST00000253363 SEPT7Q16181 437 aaKnown RBP4.25□□□□□ -1.73
RBM39-201ENST00000253363 BRAPQ7Z569 592 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 HID1Q8IV36 788 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 SVIPQ8NHG7 77 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.25□□□□□ -1.733e-8■■■□□ 14.9
RBM39-201ENST00000253363 RSPH1Q8WYR4 309 aa4.25□□□□□ -1.73
RBM39-201ENST00000253363 SCLYQ96I15 445 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms