RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 MYL3P08590 195 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 ADSSL1Q8N142 457 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 TRIM49BA6NDI0 452 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 MIF4GDA9UHW6 222 aaKnown RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 IFNB1P01574 187 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 ICAM1P05362 532 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 CETPP11597 493 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 YWHABP31946 246 aaKnown RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 GABPB1Q06547 395 aaPredicted RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 ERCC6LQ2NKX8 1250 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 EDRF1Q3B7T1 1238 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 KRT39Q6A163 491 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 HAUS6Q7Z4H7 955 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 TXNRD3Q86VQ6 643 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 PRMT6Q96LA8 375 aaPredicted RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 SPTLC3Q9NUV7 552 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 RSPH14Q9UHP6 348 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 ANO9A1A5B4 782 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 GOLGA8IPA6NC78 632 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 GOLGA8JA6NMD2 632 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 RPA1P27694 616 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 STAT5BP51692 787 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 DHX40Q8IX18 779 aaKnown RBP16.2■□□□□ 0.18
UBE4B-201ENST00000253251 FBF1Q8TES7 1133 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 ANKS1AQ92625 1134 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 PRDM10Q9NQV6 1147 aa16.2■□□□□ 0.18
UBE4B-201ENST00000253251 RFC5P40937 340 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 CFAP157Q5JU67 520 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 RNF10Q8N5U6 811 aaKnown RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ACRBPQ8NEB7 543 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 SEPT1Q8WYJ6 367 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 GPRASP2Q96D09 838 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 PSMD1Q99460 953 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 POLR3CQ9BUI4 534 aaPredicted RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 MED4Q9NPJ6 270 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 MRC1P22897 1456 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 GOLGA8KD6RF30 607 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 HIP1RO75146 1068 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 CASP1P29466 404 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ZNF568Q3ZCX4 644 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 AFAP1L2Q8N4X5 818 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ZNF526Q8TF50 670 aaPredicted RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ATP2A3Q93084 1043 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 IDI2Q9BXS1 227 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ADARB2Q9NS39 739 aaKnown RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ZNF148Q9UQR1 794 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 TMX2Q9Y320 296 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 PPFIA4O75335 1185 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 DEFB132Q7Z7B7 95 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 PROCA1Q8NCQ7 364 aaPredicted RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 TMEM35BQ8NCS4 154 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 LRRC4Q9HBW1 653 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 MAGOHBQ96A72 148 aaKnown RBP16.19■□□□□ 0.18
UBE4B-201ENST00000253251 ANKEF1Q9NU02 776 aa16.19■□□□□ 0.18
UBE4B-201ENST00000253251 PIK3C2AO00443 1686 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 TRIM72Q6ZMU5 477 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 GPD1LQ8N335 351 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 BEST2Q8NFU1 509 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 FAM49AQ9H0Q0 323 aaPredicted RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 SMARCAD1Q9H4L7 1026 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 MAGEB2O15479 319 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 TBC1D8O95759 1140 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 CTNNA1P35221 906 aaKnown RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 KCNJ6P48051 423 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 MXD4Q14582 209 aaPredicted RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 DNAJC21Q5F1R6 531 aaKnown RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 C3orf67Q6ZVT6 689 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 PALM2Q8IXS6 379 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 VPS37BQ9H9H4 285 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 FAM205CA6NFA0 338 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 HPDP32754 393 aaPredicted RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 ARL1P40616 181 aaPredicted RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 MXRA7P84157 204 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 THNSL1Q8IYQ7 743 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 CCDC188H7C350 402 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 RGS16O15492 202 aaPredicted RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 GPC3P51654 580 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 RNASELQ05823 741 aaKnown RBP16.18■□□□□ 0.18
UBE4B-201ENST00000253251 KRT12Q99456 494 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 STRIP2Q9ULQ0 834 aa16.18■□□□□ 0.18
UBE4B-201ENST00000253251 EIF3DO15371 548 aaKnown RBP eCLIP16.17■□□□□ 0.18
UBE4B-201ENST00000253251 ASAP2O43150 1006 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 TXNP10599 105 aaKnown RBP16.17■□□□□ 0.18
UBE4B-201ENST00000253251 KRT15P19012 456 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 HHATQ5VTY9 493 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 MORC4Q8TE76 937 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 TBC1D31Q96DN5 1066 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 ADAMTS1Q9UHI8 967 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 ITIH6Q6UXX5 1313 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 AKAP12Q02952 1782 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 DDR1Q08345 913 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 GOLGA8FQ08AF8 430 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 GOLGA8DPQ0D2H9 430 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 RIOX1Q9H6W3 641 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 SLC12A6Q9UHW9 1150 aa16.17■□□□□ 0.18
UBE4B-201ENST00000253251 CALB1P05937 261 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms