RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 ZFYVE27Q5T4F4 411 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 SELENOSQ9BQE4 189 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.05■□□□□ 0.87e-6■■□□□ 11.5
LRP3-201ENST00000253193 ZNF577Q9BSK1 485 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 OSGEPQ9NPF4 335 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 A0A087WUV0 522 aaPredicted RBP20.05■□□□□ 0.8
LRP3-201ENST00000253193 EML1O00423 815 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 SHOX2O60902 331 aaPredicted RBP20.05■□□□□ 0.8
LRP3-201ENST00000253193 MMP10P09238 476 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 IFT88Q13099 833 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 HHIPL2Q6UWX4 724 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 NOVA2Q9UNW9 492 aaKnown RBP20.05■□□□□ 0.8
LRP3-201ENST00000253193 K7ENM7 598 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 STAT2P52630 851 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 BANK1Q8NDB2 785 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 CERKQ8TCT0 537 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 NYAP2Q9P242 653 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 SUGT1Q9Y2Z0 365 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 PCDHGC5Q9Y5F6 944 aa20.05■□□□□ 0.8
LRP3-201ENST00000253193 NPR1P16066 1061 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 RUFY4Q6ZNE9 571 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 CPLX4Q7Z7G2 160 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 CAVIN3Q969G5 261 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 ATP6V1G3Q96LB4 118 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 ARHGEF10LQ9HCE6 1279 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 FBXL5Q9UKA1 691 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 ATF5Q9Y2D1 282 aaPredicted RBP20.04■□□□□ 0.8
LRP3-201ENST00000253193 ZNF233A6NK53 670 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 IRX3P78415 501 aaPredicted RBP20.04■□□□□ 0.8
LRP3-201ENST00000253193 MYL7Q01449 175 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 TPCN2Q8NHX9 752 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 EHMT1Q9H9B1 1298 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 EYA4O95677 639 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 ZNF746Q6NUN9 644 aaPredicted RBP20.04■□□□□ 0.8
LRP3-201ENST00000253193 RINT1Q6NUQ1 792 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 IRF2BP2Q7Z5L9 587 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 GPATCH11Q8N954 259 aa20.04■□□□□ 0.8
LRP3-201ENST00000253193 UBE2TQ9NPD8 197 aaPredicted RBP20.04■□□□□ 0.8
LRP3-201ENST00000253193 IGKV6D-41A0A0C4DH26 115 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 SPATA31C1P0DKV0 1188 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 PLTPP55058 493 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 ERVK-9P63128 1117 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 TNIP1Q15025 636 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 RUBCNQ92622 972 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 A6NNZ2 444 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 GAP43P17677 238 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 TUBB8Q3ZCM7 444 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 SLC35G2Q8TBE7 412 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 RBM46Q8TBY0 533 aaKnown RBP20.03■□□□□ 0.8
LRP3-201ENST00000253193 INPP4AQ96PE3 977 aaPredicted RBP20.03■□□□□ 0.8
LRP3-201ENST00000253193 TRIM51Q9BSJ1 452 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 GDF3Q9NR23 364 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 POLRMTO00411 1230 aaKnown RBP20.03■□□□□ 0.8
LRP3-201ENST00000253193 LMNB1P20700 586 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 ECE1P42892 770 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 MIGA2Q7L4E1 593 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 SLC35C1Q96A29 364 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 TMOD4Q9NZQ9 345 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 PRR12Q9ULL5 1215 aa20.03■□□□□ 0.8
LRP3-201ENST00000253193 LSP1P33241 339 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 PDE6BP35913 854 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 MESDQ14696 234 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 CCDC127Q96BQ5 260 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 RBAK-RBAKDNI3L0D1 243 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 PODNQ7Z5L7 613 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 TRAF3IP3Q9Y228 551 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 PCDHA2Q9Y5H9 948 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 STK24Q9Y6E0 443 aa20.02■□□□□ 0.8
LRP3-201ENST00000253193 CUL1Q13616 776 aa20.02■□□□□ 0.79
LRP3-201ENST00000253193 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.79
LRP3-201ENST00000253193 DNAJC18Q9H819 358 aa20.02■□□□□ 0.79
LRP3-201ENST00000253193 SPOPO43791 374 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 BUB1BO60566 1050 aaPredicted RBP20.01■□□□□ 0.79
LRP3-201ENST00000253193 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
LRP3-201ENST00000253193 HSD17B3P37058 310 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 SSR1P43307 286 aaKnown RBP20.01■□□□□ 0.79
LRP3-201ENST00000253193 ARHGAP27Q6ZUM4 889 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 HMGB1P1B2RPK0 211 aaPredicted RBP20.01■□□□□ 0.79
LRP3-201ENST00000253193 ECE2O60344 883 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 BCRP11274 1271 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 TMOD1P28289 359 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 SOX5P35711 763 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 SP4Q02446 784 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 MCTP2Q6DN12 878 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 CCDC121Q6ZUS5 278 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 ETNPPLQ8TBG4 499 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 PTPN22Q9Y2R2 807 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 MYO1FO00160 1098 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 DDX3XO00571 662 aaKnown RBP eCLIP20.01■□□□□ 0.796e-7■■■■□ 21
LRP3-201ENST00000253193 MKRN4PQ13434 485 aaPredicted RBP20.01■□□□□ 0.79
LRP3-201ENST00000253193 HYIQ5T013 277 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 PPM1KQ8N3J5 372 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 NACC1Q96RE7 527 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 PLCB1Q9NQ66 1216 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 SNX24Q9Y343 169 aa20.01■□□□□ 0.79
LRP3-201ENST00000253193 CCDC169A6NNP5 214 aa20■□□□□ 0.79
LRP3-201ENST00000253193 PPP1R37O75864 691 aa20■□□□□ 0.79
LRP3-201ENST00000253193 GUCY2CP25092 1073 aa20■□□□□ 0.79
LRP3-201ENST00000253193 GCLMP48507 274 aa20■□□□□ 0.79
LRP3-201ENST00000253193 FMO5P49326 533 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms