RNA–Protein interactions for RNA: ENST00000252699.6

ACTN4-201, Transcript of actinin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTN4, Length 4,963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-201ENST00000252699 TRIM49P0CI25 452 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 TRIM49CP0CI26 452 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 FXR2P51116 673 aaKnown RBP eCLIP18.43■□□□□ 0.544e-7■■■□□ 18.1
ACTN4-201ENST00000252699 BFSP1Q12934 665 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 PPP2R5DQ14738 602 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 DNAJC24Q6P3W2 148 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 REEP2Q9BRK0 252 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 COX16Q9P0S2 106 aa18.43■□□□□ 0.54
ACTN4-201ENST00000252699 RPS6P62753 249 aaKnown RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 DACT2Q5SW24 774 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 MXRA8Q9BRK3 442 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 GINM1Q9NU53 330 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 RIC1Q4ADV7 1423 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 PDXKO00764 312 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 SNAPC2Q13487 334 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 ZNF667Q5HYK9 610 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 BSPRYQ5W0U4 402 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 PPP1R2P3Q6NXS1 205 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 ANKRD13AQ8IZ07 590 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 MED7O43513 233 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 STAMBPO95630 424 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 VIMP08670 466 aaKnown RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 SHMT1P34896 483 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 TOB1P50616 345 aaPredicted RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 VPS37BQ9H9H4 285 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 DDX4Q9NQI0 724 aaKnown RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 KCNQ5Q9NR82 932 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 PGRMC1O00264 195 aaKnown RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 CTNNA1P35221 906 aaKnown RBP18.42■□□□□ 0.54
ACTN4-201ENST00000252699 SAMD15Q9P1V8 674 aa18.42■□□□□ 0.54
ACTN4-201ENST00000252699 NDC80O14777 642 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 RPA1P27694 616 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 PPM1FP49593 454 aaPredicted RBP18.41■□□□□ 0.54
ACTN4-201ENST00000252699 XKR3Q5GH77 459 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 MAP7D3Q8IWC1 876 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 NSMCE1Q8WV22 266 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 RIT2Q99578 217 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 TMX2Q9Y320 296 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 A0A1W2PQC6 194 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 SLC37A4O43826 429 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 OAS2P29728 719 aaKnown RBP18.41■□□□□ 0.54
ACTN4-201ENST00000252699 ZNF394Q53GI3 561 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 APOBEC3HQ6NTF7 200 aaKnown RBP18.41■□□□□ 0.54
ACTN4-201ENST00000252699 KCNV1Q6PIU1 500 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 PKN1Q16512 942 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 C2orf40Q9H1Z8 148 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 ODF2LQ9ULJ1 636 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 BAZ2BQ9UIF8 2168 aaKnown RBP18.41■□□□□ 0.54
ACTN4-201ENST00000252699 INPP5BP32019 993 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 GMCL1Q96IK5 515 aa18.41■□□□□ 0.54
ACTN4-201ENST00000252699 LIMA1Q9UHB6 759 aaKnown RBP18.41■□□□□ 0.54
ACTN4-201ENST00000252699 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-201ENST00000252699 TM4SF1P30408 202 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 PPANQ9NQ55 473 aaKnown RBP18.4■□□□□ 0.54
ACTN4-201ENST00000252699 DGAT1O75907 488 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 KRT15P19012 456 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 RNASELQ05823 741 aaKnown RBP18.4■□□□□ 0.54
ACTN4-201ENST00000252699 GRIK5Q16478 980 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 KCNH7Q9NS40 1196 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 ICAM1P05362 532 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 GNAT1P11488 350 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 HEXIM2Q96MH2 286 aaKnown RBP18.4■□□□□ 0.54
ACTN4-201ENST00000252699 NBPF12Q5TAG4 269 aaPredicted RBP18.4■□□□□ 0.54
ACTN4-201ENST00000252699 PLCD4Q9BRC7 762 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 RIOX1Q9H6W3 641 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 RNF14Q9UBS8 474 aa18.4■□□□□ 0.54
ACTN4-201ENST00000252699 ITIH3Q06033 890 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 KRT39Q6A163 491 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 FRMD5Q7Z6J6 570 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 FAM83AQ86UY5 434 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 SEPT1Q8WYJ6 367 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 HAUS1Q96CS2 278 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 TAAR1Q96RJ0 339 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 MRPL4Q9BYD3 311 aaKnown RBP18.39■□□□□ 0.53
ACTN4-201ENST00000252699 PASKQ96RG2 1323 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 ZMYND10O75800 440 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 CEP85LQ5SZL2 805 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 CCDC121Q6ZUS5 278 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 TAB3Q8N5C8 712 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-201ENST00000252699 TOPORSQ9NS56 1045 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-201ENST00000252699 MRC1P22897 1456 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 DRAP1Q14919 205 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-201ENST00000252699 TAF1CQ15572 869 aaPredicted RBP18.39■□□□□ 0.53
ACTN4-201ENST00000252699 TAOK1Q7L7X3 1001 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 METTL23Q86XA0 190 aa18.39■□□□□ 0.53
ACTN4-201ENST00000252699 A0A1B0GTH6 734 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 A6NJR5 290 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 NDUFAB1O14561 156 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 TNFAIP2Q03169 654 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 OR6B2Q6IFH4 312 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 C15orf52Q6ZUT6 534 aaKnown RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 ADGRG1Q9Y653 693 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 SLC26A4O43511 780 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 RNF149Q8NC42 400 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 INTS2Q9H0H0 1204 aaKnown RBP18.38■□□□□ 0.53
ACTN4-201ENST00000252699 PTPN22Q9Y2R2 807 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 EMSYQ7Z589 1322 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 KIF13AQ9H1H9 1805 aa18.38■□□□□ 0.53
ACTN4-201ENST00000252699 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms