RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 PFDN6O15212 129 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CASP1P29466 404 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MTMR3Q13615 1198 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KRT31Q15323 416 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KYAT1Q16773 422 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SMAP1Q8IYB5 467 aaPredicted RBP13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SLC4A9Q96Q91 983 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CCSER1Q9C0I3 900 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 STXBP3O00186 592 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 HIP1RO75146 1068 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KRT15P19012 456 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CASP7P55210 303 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PALM2Q8IXS6 379 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 RIT2Q99578 217 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SUCLA2Q9P2R7 463 aaPredicted RBP13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DDX41Q9UJV9 622 aaKnown RBP13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ESYT2A0FGR8 921 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KIF28PB7ZC32 967 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ERICH1Q86X53 443 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 RFX6Q8HWS3 928 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SALL1Q9NSC2 1324 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KIF1AQ12756 1690 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ATP2C2O75185 946 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SERPING1P05155 500 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ICAM1P05362 532 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 RGS2P41220 211 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MAP7D1Q3KQU3 841 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 TTC39CQ8N584 583 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 FAM76AQ8TAV0 307 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MXRA8Q9BRK3 442 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
ZKSCAN3-201ENST00000252211 U2AF2P26368 475 aaKnown RBP eCLIP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 LMNB2Q03252 620 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 TROAPQ12815 778 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ZNF394Q53GI3 561 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 C10orf76Q5T2E6 689 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ADAT2Q7Z6V5 191 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 FMR1NBQ8N0W7 255 aaPredicted RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ATP2A3Q93084 1043 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DDTLA6NHG4 134 aaPredicted RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CDC25BP30305 580 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CIITAP33076 1130 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 IER5Q5VY09 327 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 TMEM35BQ8NCS4 154 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 P3H4Q92791 437 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 GLT1D1Q96MS3 346 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 AGO2Q9UKV8 859 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PRPSAP2O60256 369 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PRPSAP1Q14558 356 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SCN4BQ8IWT1 228 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KRT12Q99456 494 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MROH8Q9H579 483 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DNAJC12Q9UKB3 198 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PIN4Q9Y237 131 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 TMX2Q9Y320 296 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MAP2P11137 1827 aaKnown RBP13.16□□□□□ -0.3
ZKSCAN3-201ENST00000252211 SH3BP5O60239 455 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PRCPP42785 496 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 LAMC2Q13753 1193 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ARL13BQ3SXY8 428 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CEP57Q86XR8 500 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PPM1EQ8WY54 764 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 RRAGCQ9HB90 399 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 RBAKQ9NYW8 714 aaPredicted RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 WNT10BO00744 389 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PRKCBP05771 671 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 EIF4A3P38919 411 aaKnown RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KCNJ6P48051 423 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 VAMP7P51809 220 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 AFAP1L2Q8N4X5 818 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 BBOF1Q8ND07 529 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CCNYQ8ND76 341 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ZBTB9Q96C00 473 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CCDC68Q9H2F9 335 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ERAP1Q9NZ08 941 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 EIF3CLB5ME19 914 aaKnown RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 HPDP32754 393 aaPredicted RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DACT2Q5SW24 774 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 EIF3CQ99613 913 aaKnown RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 LBHD1Q9BQE6 289 aaPredicted RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 CALN1Q9BXU9 219 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 VPS18Q9P253 973 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KIAA0391O15091 583 aaKnown RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ALDH1A1P00352 501 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 TBXAS1P24557 533 aaPredicted RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 MAN1A1P33908 653 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 DENND2CQ68D51 928 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 KRT39Q6A163 491 aa13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 ALKBH5Q6P6C2 394 aaKnown RBP13.15□□□□□ -0.3
ZKSCAN3-201ENST00000252211 PLEKHH3Q7Z736 793 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms