RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 IQCKQ8N0W5 287 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 MREGQ8N565 214 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 PRPF38AQ8NAV1 312 aaKnown RBP18.56■□□□□ 0.56
FOXA1-201ENST00000250448 LPAR1Q92633 364 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 NUCKS1Q9H1E3 243 aaKnown RBP18.56■□□□□ 0.56
FOXA1-201ENST00000250448 FAM153AQ9UHL3 310 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 ATXN2Q99700 1313 aaKnown RBP18.56■□□□□ 0.56
FOXA1-201ENST00000250448 ESYT3A0FGR9 886 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 PALMO75781 387 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 SERPING1P05155 500 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 LRRC41Q15345 812 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 PRR16Q569H4 304 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 FOXR2Q6PJQ5 311 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 GLIS3Q8NEA6 775 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 NUDT12Q9BQG2 462 aa18.56■□□□□ 0.56
FOXA1-201ENST00000250448 LUC7LQ9NQ29 371 aaKnown RBP18.56■□□□□ 0.56
FOXA1-201ENST00000250448 GRID2IPA4D2P6 1211 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 ZNF233A6NK53 670 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 NFIBO00712 420 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 TLR2O60603 784 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 ALAS1P13196 640 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 EPHX2P34913 555 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 EHHADHQ08426 723 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 PSMD2Q13200 908 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 VGLL4Q14135 290 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 B4GALNT4Q76KP1 1039 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.55■□□□□ 0.56
FOXA1-201ENST00000250448 IFT81Q8WYA0 676 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 SYN2Q92777 582 aaPredicted RBP18.55■□□□□ 0.56
FOXA1-201ENST00000250448 ATG4CQ96DT6 458 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 FTCDO95954 541 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 DNA2P51530 1060 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 CCDC40Q4G0X9 1142 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 PPP4R3AQ6IN85 833 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 DDX12PQ92771 950 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 LSM14BQ9BX40 385 aaKnown RBP18.55■□□□□ 0.56
FOXA1-201ENST00000250448 COL4A3BPQ9Y5P4 624 aa18.55■□□□□ 0.56
FOXA1-201ENST00000250448 FAM86B1E9PN63 330 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 FAM86B2P0C5J1 330 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 NAB2Q15742 525 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 CD302Q8IX05 232 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 SNX29Q8TEQ0 813 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 CASKIN2Q8WXE0 1202 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 LRRC27Q9C0I9 530 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 GLT8D2Q9H1C3 349 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 NOL4O94818 638 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 STAT3P40763 770 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 AP3B2Q13367 1082 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 MYOCDQ8IZQ8 938 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 CLMNQ96JQ2 1002 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 RNPC3Q96LT9 517 aaKnown RBP18.54■□□□□ 0.56
FOXA1-201ENST00000250448 KRT12Q99456 494 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 WDR18Q9BV38 432 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 RAB34Q9BZG1 259 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
FOXA1-201ENST00000250448 PEX10O60683 326 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 PLA2G6O60733 806 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 POTEIP0CG38 1075 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 POTEJP0CG39 1038 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 GUCY2FP51841 1108 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 TMEM119Q4V9L6 283 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 PIK3R5Q8WYR1 880 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 INPP4AQ96PE3 977 aaPredicted RBP18.53■□□□□ 0.56
FOXA1-201ENST00000250448 PCDHGC5Q9Y5F6 944 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 SNCAIPQ9Y6H5 919 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 PITPNM2Q9BZ72 1349 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 GCOM1H8Y6P7 765 aaPredicted RBP18.53■□□□□ 0.56
FOXA1-201ENST00000250448 ZEB2O60315 1214 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 POLR2MP0CAP2 368 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 KLRC1P26715 233 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 MEI1Q5TIA1 1274 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 KCNK18Q7Z418 384 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 CRYGNQ8WXF5 182 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 AS3MTQ9HBK9 375 aa18.53■□□□□ 0.56
FOXA1-201ENST00000250448 ICAM1P05362 532 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 LSP1P33241 339 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 FKBP3Q00688 224 aaKnown RBP18.52■□□□□ 0.56
FOXA1-201ENST00000250448 TTLL12Q14166 644 aaPredicted RBP18.52■□□□□ 0.56
FOXA1-201ENST00000250448 KRT79Q5XKE5 535 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 WHAMMQ8TF30 809 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 YY1AP1Q9H869 796 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 PPP1R9AQ9ULJ8 1098 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 MRPL11Q9Y3B7 192 aaKnown RBP18.52■□□□□ 0.56
FOXA1-201ENST00000250448 NR1D1P20393 614 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 POLR2FP61218 127 aaKnown RBP18.52■□□□□ 0.56
FOXA1-201ENST00000250448 COASYQ13057 564 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 MCTP2Q6DN12 878 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 SPATS2Q86XZ4 545 aaKnown RBP18.52■□□□□ 0.56
FOXA1-201ENST00000250448 GINM1Q9NU53 330 aa18.52■□□□□ 0.56
FOXA1-201ENST00000250448 TRAF5O00463 557 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 KIAA0754O94854 1291 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 SREBF1P36956 1147 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 EMC10Q5UCC4 262 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 FBXW10Q5XX13 1052 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 ELP3Q9H9T3 547 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 SLC38A10Q9HBR0 1119 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 COL20A1Q9P218 1284 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 PCDHA12Q9UN75 941 aa18.52■□□□□ 0.55
FOXA1-201ENST00000250448 ZNF76P36508 570 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms