RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ACER1Q8TDN7 264 aa11.05□□□□□ -0.64
COPB1-201ENST00000249923 SCFD2Q8WU76 684 aa11.05□□□□□ -0.64
COPB1-201ENST00000249923 AP1M1Q9BXS5 423 aa11.05□□□□□ -0.64
COPB1-201ENST00000249923 OSGEPQ9NPF4 335 aa11.05□□□□□ -0.64
COPB1-201ENST00000249923 ATRNL1Q5VV63 1379 aa11.05□□□□□ -0.64
COPB1-201ENST00000249923 KCNK3O14649 394 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 ECE2O60344 883 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 GCNT3O95395 438 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 GLE1Q53GS7 698 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 ALKBH5Q6P6C2 394 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 EP400NLQ6ZTU2 488 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 TMEM179Q6ZVK1 233 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 SLFN11Q7Z7L1 901 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 KLHL7Q8IXQ5 586 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 GIMAP7Q8NHV1 300 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 PRMT6Q96LA8 375 aaPredicted RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 TYW1Q9NV66 732 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 PSMD10O75832 226 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 ABCB5Q2M3G0 1257 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 TAX1BP1Q86VP1 789 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 CCDC113Q9H0I3 377 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 TSKSQ9UJT2 592 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 PCDHB13Q9Y5F0 798 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 H0YGN5 161 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 CHMP2AO43633 222 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 CYP3A4P08684 503 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 MMP10P09238 476 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 CDR1P51861 262 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 SLC20A2Q08357 652 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 PODNQ7Z5L7 613 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 AKT1S1Q96B36 256 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 DYDC2Q96IM9 177 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 NAP1L4Q99733 375 aaKnown RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 POLR3CQ9BUI4 534 aaPredicted RBP11.04□□□□□ -0.64
COPB1-201ENST00000249923 OLFML3Q9NRN5 406 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 TAS2R14Q9NYV8 317 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 NFS1Q9Y697 457 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 MYH11P35749 1972 aa11.04□□□□□ -0.64
COPB1-201ENST00000249923 COL4A5P29400 1685 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 TISP43B9A030 160 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 EIF3HO15372 352 aaKnown RBP eCLIP11.03□□□□□ -0.646e-6■■■■□ 25.8
COPB1-201ENST00000249923 EYA4O95677 639 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 RBM5P52756 815 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPB1-201ENST00000249923 STRIP1Q5VSL9 837 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 DAW1Q8N136 415 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 MREGQ8N565 214 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 ZSWIM2Q8NEG5 633 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 FAM20AQ96MK3 541 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 ZNF219Q9P2Y4 722 aaPredicted RBP11.03□□□□□ -0.64
COPB1-201ENST00000249923 FBXL5Q9UKA1 691 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 RABGAP1Q9Y3P9 1069 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 F8VZ95 297 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 SLC26A4O43511 780 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 GFPT2O94808 682 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 BMP3P12645 472 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 NNTQ13423 1086 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 TCERG1LQ5VWI1 586 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 OR2W6PQ8NHA6 318 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 DDX47Q9H0S4 455 aaKnown RBP11.03□□□□□ -0.64
COPB1-201ENST00000249923 GLT8D2Q9H1C3 349 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 EVI5O60447 810 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 EPS15P42566 896 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 CORO7P57737 925 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 SKOR1P84550 965 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 PPFIA1Q13136 1202 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 E2F5Q15329 346 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 ALS2CLQ60I27 953 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 NT5DC3Q86UY8 548 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 RNPC3Q96LT9 517 aaKnown RBP11.03□□□□□ -0.64
COPB1-201ENST00000249923 SPAG5Q96R06 1193 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 CAPS2Q9BXY5 557 aa11.03□□□□□ -0.64
COPB1-201ENST00000249923 NOC2LQ9Y3T9 749 aaKnown RBP11.03□□□□□ -0.64
COPB1-201ENST00000249923 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 CLSTN1O94985 981 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 POU5F1Q01860 360 aaKnown RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 MAPK7Q13164 816 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 AOC3Q16853 763 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 B3GNT9Q6UX72 402 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 GLYCTKQ8IVS8 523 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 IFT20Q8IY31 132 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 ARHGEF26Q96DR7 871 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 MRIQ9BWK5 157 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 COG5Q9UP83 839 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 ZNFX1Q9P2E3 1918 aaKnown RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 EIF4E1BA6NMX2 242 aaKnown RBP11.02□□□□□ -0.65
COPB1-201ENST00000249923 GOLGA8KD6RF30 607 aa11.02□□□□□ -0.65
COPB1-201ENST00000249923 ARP10275 920 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms