RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 PEX11AO75192 247 aa19.76■□□□□ 0.75
PTPN12-201ENST00000248594 BLIDQ8IZY5 108 aa19.76■□□□□ 0.75
PTPN12-201ENST00000248594 ZSCAN10Q96SZ4 725 aaPredicted RBP19.76■□□□□ 0.75
PTPN12-201ENST00000248594 TSG101Q99816 390 aa19.76■□□□□ 0.75
PTPN12-201ENST00000248594 RNF41Q9H4P4 317 aaPredicted RBP19.76■□□□□ 0.75
PTPN12-201ENST00000248594 PRDM16Q9HAZ2 1276 aa19.76■□□□□ 0.75
PTPN12-201ENST00000248594 PRDM11Q9NQV5 511 aa19.76■□□□□ 0.75
PTPN12-201ENST00000248594 YY1P25490 414 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 NMRK1Q9NWW6 199 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 ANKIB1Q9P2G1 1089 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 BRAFP15056 766 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 MAGEA10P43363 369 aaPredicted RBP19.75■□□□□ 0.75
PTPN12-201ENST00000248594 KCNJ1P48048 391 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 BCAMP50895 628 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 TRIP13Q15645 432 aaPredicted RBP19.75■□□□□ 0.75
PTPN12-201ENST00000248594 DCAF17Q5H9S7 520 aaPredicted RBP19.75■□□□□ 0.75
PTPN12-201ENST00000248594 C6orf118Q5T5N4 469 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 CAPN12Q6ZSI9 719 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 OSGEPQ9NPF4 335 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 CHMP2BQ9UQN3 213 aa19.75■□□□□ 0.75
PTPN12-201ENST00000248594 A0A1W2PRG0 241 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 MARCH6O60337 910 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 SETSIPP0DME0 302 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 RCN1Q15293 331 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 FIGNQ5HY92 759 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 ACBD5Q5T8D3 534 aaPredicted RBP19.74■□□□□ 0.75
PTPN12-201ENST00000248594 GBP7Q8N8V2 638 aaPredicted RBP19.74■□□□□ 0.75
PTPN12-201ENST00000248594 C18orf8Q96DM3 657 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 CYTH2Q99418 400 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 RXFP1Q9HBX9 757 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 SPAG7O75391 227 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 DNAJC3Q13217 504 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 NPY5RQ15761 445 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 ASTE1Q2TB18 679 aaPredicted RBP19.74■□□□□ 0.75
PTPN12-201ENST00000248594 EXOC3L1Q86VI1 746 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 SPOCK2Q92563 424 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 ERVK-5Q9HDB9 667 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 CYP39A1Q9NYL5 469 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 SSU72P8A0A1W2PR75 194 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 ADAMTS2O95450 1211 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 ECHDC2Q86YB7 292 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 DCAF5Q96JK2 942 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 KIAA1683Q9H0B3 1180 aa19.74■□□□□ 0.75
PTPN12-201ENST00000248594 HNRNPRO43390 633 aaKnown RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 NPTXRO95502 500 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 HNRNPH3P31942 346 aaKnown RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 MCL1Q07820 350 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 UBA5Q9GZZ9 404 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 SUDS3Q9H7L9 328 aaPredicted RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 MTRF1LQ9UGC7 380 aaKnown RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 TMEM94Q12767 1356 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 ABCC12Q96J65 1359 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 EXOC3L4Q17RC7 722 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 SH3RF3Q8TEJ3 882 aaPredicted RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 AMFRQ9UKV5 643 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 MYBP10242 640 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 CFAP157Q5JU67 520 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 ZSCAN29Q8IWY8 852 aaPredicted RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 SCYL3Q8IZE3 742 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 TTLL11Q8NHH1 800 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 SCG3Q8WXD2 468 aaKnown RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 CENPTQ96BT3 561 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 OPTNQ96CV9 577 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 TBC1D10AQ9BXI6 508 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 KBTBD4Q9NVX7 518 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 NKIRAS1Q9NYS0 192 aa19.73■□□□□ 0.75
PTPN12-201ENST00000248594 ARMCX3Q9UH62 379 aaPredicted RBP19.73■□□□□ 0.75
PTPN12-201ENST00000248594 PLS1Q14651 629 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 SNX30Q5VWJ9 437 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 FOXB2Q5VYV0 432 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 RFWD3Q6PCD5 774 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 SV2BQ7L1I2 683 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 CCDC105Q8IYK2 499 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 SPATA5Q8NB90 893 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 CALML4Q96GE6 196 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 NT5C3AQ9H0P0 336 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 TXLNGQ9NUQ3 528 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 RTL9Q8NET4 1388 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 FAM196BA6NMK8 535 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 CCDC188H7C350 402 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 UNC5CO95185 931 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 BAG2O95816 211 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 MYL1P05976 194 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 GNAQP50148 359 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 KCNQ4P56696 695 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 ZNF571Q7Z3V5 609 aaPredicted RBP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 ARL10Q8N8L6 244 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 DENND2DQ9H6A0 471 aaPredicted RBP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 ZNF335Q9H4Z2 1342 aaPredicted RBP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 WDR91A4D1P6 747 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 KRT36O76013 467 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 CIAO1O76071 339 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 AGTP01019 485 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 SKIP12755 728 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 SLC9A1P19634 815 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 AMPD3Q01432 767 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 MGAT5Q09328 741 aa19.72■□□□□ 0.75
PTPN12-201ENST00000248594 AUHQ13825 339 aaKnown RBP19.72■□□□□ 0.75
PTPN12-201ENST00000248594 LRRC36Q1X8D7 754 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms