RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 PCDHA10Q9Y5I2 948 aa18.75■□□□□ 0.59
CDKN1A-201ENST00000244741 PTCH2Q9Y6C5 1203 aa18.75■□□□□ 0.59
CDKN1A-201ENST00000244741 RBM47A0AV96 593 aaKnown RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 N4BP3O15049 544 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 MFAP3LO75121 409 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 GYPCP04921 128 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 SSBP05455 408 aaKnown RBP eCLIP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 PRKAR2AP13861 404 aaKnown RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 CCND3P30281 292 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 CASQ1P31415 396 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 FXR1P51114 621 aaKnown RBP eCLIP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 TCP11X2Q5H9J9 407 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 TRIM50Q86XT4 487 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 TAB2Q9NYJ8 693 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 GSTTP1A0A1W2PQM5 241 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 DYNC1LI2O43237 492 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 TCF7P36402 384 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 COPB1P53618 953 aaKnown RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 MCM6Q14566 821 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 DUSP28Q4G0W2 176 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 UTP14CQ5TAP6 766 aaKnown RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 ABHD15Q6UXT9 468 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 GIMAP8Q8ND71 665 aaPredicted RBP18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 AFG1LQ8WV93 481 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 BLOC1S4Q9NUP1 217 aa18.74■□□□□ 0.59
CDKN1A-201ENST00000244741 ITIH6Q6UXX5 1313 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 KCNJ18B7U540 433 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 KLRC4O43908 158 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 JAK3P52333 1124 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 KCNJ12Q14500 433 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 TMEM119Q4V9L6 283 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 IQSEC1Q6DN90 963 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 ADSSL1Q8N142 457 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 SH3TC2Q8TF17 1288 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 GPR20Q99678 358 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 CARD6Q9BX69 1037 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 NAA15Q9BXJ9 866 aaKnown RBP18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 ADGRG1Q9Y653 693 aa18.73■□□□□ 0.59
CDKN1A-201ENST00000244741 GH1P01241 217 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 CCDC175P0C221 793 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 CYBAP13498 195 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 H2AFXP16104 143 aaPredicted RBP18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 SFNP31947 248 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 SPAG1Q07617 926 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 IRF5Q13568 498 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 IRF2BP1Q8IU81 584 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 CREBRFQ8IUR6 639 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 OR6J1Q8NGC5 347 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 POLR3CQ9BUI4 534 aaPredicted RBP18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 SRRTQ9BXP5 876 aaKnown RBP18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 ZMYND15Q9H091 742 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 KBTBD4Q9NVX7 518 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 A0A0U1RQJ8 604 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 TRIM49BA6NDI0 452 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 RNF225M0QZC1 329 aaPredicted RBP18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 GNRH1P01148 92 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 P4HBP07237 508 aaKnown RBP18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 PSAPP07602 524 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 SUPT20HL2P0C7V6 817 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 LBX1P52954 281 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 ARHGEF6Q15052 776 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 MIS18BP1Q6P0N0 1132 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 ATRIPQ8WXE1 791 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 POLD4Q9HCU8 107 aa18.72■□□□□ 0.59
CDKN1A-201ENST00000244741 MYCNP04198 464 aaPredicted RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 MARK3P27448 753 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 PMS1P54277 932 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 RAD51AP2Q09MP3 1159 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 KCNB1Q14721 858 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 ARHGAP29Q52LW3 1261 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 CNGA4Q8IV77 575 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 SEPT1Q8WYJ6 367 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 PCYT2Q99447 389 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 IRX2Q9BZI1 471 aaPredicted RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 FAM184BQ9ULE4 1060 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 GNEQ9Y223 722 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 KDM3AQ9Y4C1 1321 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 ZNF862O60290 1169 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 TADA3O75528 432 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 HMGCRP04035 888 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 HSPA1AP0DMV8 641 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 HSPA1BP0DMV9 641 aaKnown RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 HYIQ5T013 277 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 TLK2Q86UE8 772 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 MNS1Q8NEH6 495 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 PPP1R13LQ8WUF5 828 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 RAD54LQ92698 747 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 BHMT2Q9H2M3 363 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 TUFT1Q9NNX1 390 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 BMP2KQ9NSY1 1161 aaPredicted RBP18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 ZNF446Q9NWS9 450 aa18.71■□□□□ 0.59
CDKN1A-201ENST00000244741 INHAP05111 366 aa18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 ZNF286BP0CG31 522 aa18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 ZSCAN20P17040 1043 aaPredicted RBP18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 FECHP22830 423 aa18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 CHMP4BP1P59074 171 aa18.7■□□□□ 0.58
CDKN1A-201ENST00000244741 BEX3Q00994 111 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms