RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CARSP49589 748 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 SLC30A5Q8TAD4 765 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 NCLNQ969V3 563 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 RIOK1Q9BRS2 568 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 EPN3Q9H201 632 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 WARS2Q9UGM6 360 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 HNRNPDLO14979 420 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 SERPINB4P48594 390 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 DNAJC24Q6P3W2 148 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 PCGF5Q86SE9 256 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 PBKQ96KB5 322 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 ATP8A2Q9NTI2 1148 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 V9GYQ6 96 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 A0A0U1RQJ8 604 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 PRPF31Q8WWY3 499 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 CCPG1Q9ULG6 757 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 LINC00854A0A1B0GVQ3 168 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 A6NJR5 290 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 HMGB1P1B2RPK0 211 aaPredicted RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 HAUS5O94927 633 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 PYROXD1Q8WU10 500 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 SLC38A10Q9HBR0 1119 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 HEY1Q9Y5J3 304 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 ABCA5Q8WWZ7 1642 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 HADHAP40939 763 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 HADHQ16836 314 aaKnown RBP8.07□□□□□ -1.12
RIF1-201ENST00000243326 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 PPM1NQ8N819 430 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 RASSF10A6NK89 507 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 POTECB2RU33 542 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 H3BRJ5 948 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 ZBED4O75132 1171 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 TRIM59Q8IWR1 403 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 CCNYL1Q8N7R7 359 aa8.07□□□□□ -1.12
RIF1-201ENST00000243326 POLR2MP0CAP2 368 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ANKRD40Q6AI12 368 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SEC16BQ96JE7 1060 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 POGZQ7Z3K3 1410 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 DBNDD1Q9H9R9 158 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ANAPC7Q9UJX3 599 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 TCN1P20061 433 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 MTERF2Q49AM1 385 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SH3RF3Q8TEJ3 882 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 THAP9Q9H5L6 903 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SMNDC1O75940 238 aaKnown RBP eCLIP8.06□□□□□ -1.121e-7■□□□□ 8.5
RIF1-201ENST00000243326 CCNE1P24864 410 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PTPN12Q05209 780 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 PRPSAP1Q14558 356 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 EPC2Q52LR7 807 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ATP6V1B1P15313 513 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PDIA2Q13087 525 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 RASSF3Q86WH2 238 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 COG1Q8WTW3 980 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PLEKP08567 350 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 ZBTB17Q13105 803 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 CUL3Q13618 768 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ARMC2Q8NEN0 867 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 HEXIM2Q96MH2 286 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 NVLO15381 856 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 ICA1Q05084 483 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SARM1Q6SZW1 724 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 MAP7D3Q8IWC1 876 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 STAG2Q8N3U4 1231 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 BHMT2Q9H2M3 363 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 OLA1Q9NTK5 396 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 PPP2R5EQ16537 467 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 CROCCP2Q86T23 111 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 NAP1L4Q99733 375 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 FOXP1Q9H334 677 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 CLEC10AQ8IUN9 316 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 SDCCAG3Q96C92 435 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 FAF2Q96CS3 445 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 C11orf70Q9BRQ4 267 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 CNOT8Q9UFF9 292 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 BICRAQ9NZM4 1560 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ARHGEF10O15013 1369 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L15C9J2P7 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L13C9JLJ4 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L11C9JVI0 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L18D6R9N7 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L22D6RA61 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L17D6RBQ6 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L19D6RCP7 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L20D6RJB6 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 MDH1P40925 334 aaKnown RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 ARPP19P56211 112 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 PRAMEP78395 509 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L24Q0WX57 530 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 USP17L6PQ6QN14 398 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 ANGPTL8Q6UXH0 198 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 NLRX1Q86UT6 975 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 IL1RL2Q9HB29 575 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 YWHAHQ04917 246 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 CERKLQ49MI3 558 aaPredicted RBP8.06□□□□□ -1.12
RIF1-201ENST00000243326 RINT1Q6NUQ1 792 aa8.06□□□□□ -1.12
RIF1-201ENST00000243326 CNBD2Q96M20 576 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms