RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 LTBP4Q8N2S1 1624 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 NCANO14594 1321 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 IGSF9BQ9UPX0 1349 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 KCNK3O14649 394 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 PLCB4Q15147 1175 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
SEC61A1-201ENST00000243253 DNM1LO00429 736 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 OPLAHO14841 1288 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 TGFB1I1O43294 461 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 TTLL1O95922 423 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 GTF2A1P52655 376 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 KCNA1Q09470 495 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 NFIAQ12857 509 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 TNFAIP8L3Q5GJ75 292 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 CUL5Q93034 780 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 BZW2Q9Y6E2 419 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 GTPBP10A4D1E9 387 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEFA5A3E0 1075 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 PPFIA2O75334 1257 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 NR2F2P24468 414 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 CASP4P49662 377 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 MMP14P50281 582 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 Q4G0T1 1027 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 POTEEQ6S8J3 1075 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 GPBP1Q86WP2 473 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 KLHL7Q8IXQ5 586 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 REEP2Q9BRK0 252 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 IKZF4Q9H2S9 585 aa13.04□□□□□ -0.32
SEC61A1-201ENST00000243253 PDXKO00764 312 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 COL11A2P13942 1736 aaPredicted RBP13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 SP4Q02446 784 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 PABPC4Q13310 644 aaKnown RBP eCLIP13.03□□□□□ -0.326e-7■□□□□ 10.6
SEC61A1-201ENST00000243253 RPS6KA1Q15418 735 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 NFIL3Q16649 462 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 PRR16Q569H4 304 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 CEP85LQ5SZL2 805 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 AGBL2Q5U5Z8 902 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 AP1M1Q9BXS5 423 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 PLCG2P16885 1265 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 TNNC1P63316 161 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 ALKBH5Q6P6C2 394 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 DDX47Q9H0S4 455 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 CLRN2A0PK11 232 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 F8VZ95 297 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 RBM26Q5T8P6 1007 aaKnown RBP13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 PRR5LQ6MZQ0 368 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 GJB7Q6PEY0 223 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 ZFPM1Q8IX07 1006 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 CCDC13Q8IYE1 715 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 AMACRQ9UHK6 382 aa13.03□□□□□ -0.32
SEC61A1-201ENST00000243253 AFPP02771 609 aaKnown RBP13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 RPA1P27694 616 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 SMTNP53814 917 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 BIRC3Q13489 604 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 PRPF4BQ13523 1007 aaKnown RBP13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 LACTB2Q53H82 288 aaPredicted RBP13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 UBAP2Q5T6F2 1119 aaKnown RBP13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 SLITRK6Q9H5Y7 841 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.32
SEC61A1-201ENST00000243253 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 FAM86B1E9PN63 330 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 CCDC188H7C350 402 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 PGRMC1O00264 195 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 SLC16A3O15427 465 aaKnown RBP13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 FAM86B2P0C5J1 330 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 RSPH10BP0C881 870 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 MKL1Q969V6 931 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 ELMO3Q96BJ8 720 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 RUFY1Q96T51 708 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 PSTPIP2Q9H939 334 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 ERVK-5Q9HDB9 667 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 CAPN7Q9Y6W3 813 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 SCN9AQ15858 1988 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 KLRG2A4D1S0 409 aaPredicted RBP13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 CLIC2O15247 247 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 DAPK3O43293 454 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 TMOD1P28289 359 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 USP8P40818 1118 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 KLRC3Q07444 240 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 DUPD1Q68J44 220 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 ZDHHC24Q6UX98 284 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 TATDN2Q93075 761 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 ZNF317Q96PQ6 595 aaPredicted RBP13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 TRIM31Q9BZY9 425 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 HOMER2Q9NSB8 354 aa13.02□□□□□ -0.33
SEC61A1-201ENST00000243253 LRRC4BQ9NT99 713 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms