RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 ERO1BQ86YB8 467 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 FAM186BQ8IYM0 893 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 ANKRD13AQ8IZ07 590 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 SYCP3Q8IZU3 236 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 SLC35F6Q8N357 371 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 TXLNBQ8N3L3 684 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 JAKMIP2Q96AA8 810 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 AGPAT3Q9NRZ7 376 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 CGNQ9P2M7 1197 aaKnown RBP25.52■■□□□ 1.68
MSX2-201ENST00000239243 FRMD4BQ9Y2L6 1034 aa25.52■■□□□ 1.68
MSX2-201ENST00000239243 LCA5LO95447 670 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 POLR2FP61218 127 aaKnown RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 SLC9C1Q4G0N8 1177 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 TCERG1LQ5VWI1 586 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 SLC9A9Q8IVB4 645 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 L3MBTL3Q96JM7 780 aaPredicted RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 NAPGQ99747 312 aaPredicted RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 CRACR2AQ9BSW2 395 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 GUCA1BQ9UMX6 200 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 GTPBP10A4D1E9 387 aaKnown RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 CASP4P49662 377 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 KIF11P52732 1056 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 VAV2P52735 878 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 MAPK8IP2Q13387 824 aaPredicted RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 RIOX2Q8IUF8 465 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 ST6GALNAC4Q9H4F1 302 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 JPH1Q9HDC5 661 aaPredicted RBP25.51■■□□□ 1.67
MSX2-201ENST00000239243 NLRC4Q9NPP4 1024 aa25.51■■□□□ 1.67
MSX2-201ENST00000239243 KIAA1217Q5T5P2 1943 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 A0A0G2JLL6 359 aaPredicted RBP25.5■■□□□ 1.67
MSX2-201ENST00000239243 CXCL11O14625 94 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 PSAPP07602 524 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 EXOC3L4Q17RC7 722 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 XKR9Q5GH70 373 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 PRRT2Q7Z6L0 340 aaPredicted RBP25.5■■□□□ 1.67
MSX2-201ENST00000239243 ANKRD35Q8N283 1001 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 SLC35C1Q96A29 364 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 BORCS6Q96GS4 357 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 DMAC2Q9NW81 257 aa25.5■■□□□ 1.67
MSX2-201ENST00000239243 EFCAB8A8MWE9 144 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 SPATA31C2B4DYI2 1134 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 AKR1B10O60218 316 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 RGS20O76081 388 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 YBX3P16989 372 aaKnown RBP eCLIP25.49■■□□□ 1.67
MSX2-201ENST00000239243 EIF4A3P38919 411 aaKnown RBP25.49■■□□□ 1.67
MSX2-201ENST00000239243 KIF5AQ12840 1032 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 STXBP2Q15833 593 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 GBP6Q6ZN66 633 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 GADL1Q6ZQY3 521 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 TMEM174Q8WUU8 243 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 CARD6Q9BX69 1037 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 GANQ9H2C0 597 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 BACH1O14867 736 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 SERPING1P05155 500 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 DLK2Q6UY11 383 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 MAEAQ7L5Y9 396 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 PDCL2Q8N4E4 241 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 ACCSQ96QU6 501 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 ELP3Q9H9T3 547 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 SLC9A2Q9UBY0 812 aa25.49■■□□□ 1.67
MSX2-201ENST00000239243 ABL1P00519 1130 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 SNRPFP62306 86 aaKnown RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 IRX3P78415 501 aaPredicted RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 NAA30Q147X3 362 aaPredicted RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 PPP2R5AQ15172 486 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 UBXN4Q92575 508 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 PDCL3Q9H2J4 239 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 FBXL5Q9UKA1 691 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 MYO6Q9UM54 1294 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 SPDYE5A6NIY4 337 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 EIF3JO75822 258 aaKnown RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 PLEKP08567 350 aaPredicted RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 UTP14CQ5TAP6 766 aaKnown RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 CNKSR2Q8WXI2 1034 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 CDCA5Q96FF9 252 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 OTUD5Q96G74 571 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 IFIH1Q9BYX4 1025 aaKnown RBP25.48■■□□□ 1.67
MSX2-201ENST00000239243 CDC23Q9UJX2 597 aa25.48■■□□□ 1.67
MSX2-201ENST00000239243 IRF6O14896 467 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 ELF2Q15723 593 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 KSR1Q8IVT5 923 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 AIPL1Q9NZN9 384 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 GABBR1Q9UBS5 961 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.47■■□□□ 1.67
MSX2-201ENST00000239243 V9GYY5 206 aaPredicted RBP25.47■■□□□ 1.67
MSX2-201ENST00000239243 ICAM3P32942 547 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 TDRD12Q587J7 1177 aaKnown RBP25.47■■□□□ 1.67
MSX2-201ENST00000239243 C12orf56Q8IXR9 622 aa25.47■■□□□ 1.67
MSX2-201ENST00000239243 LUC7LQ9NQ29 371 aaKnown RBP25.47■■□□□ 1.67
MSX2-201ENST00000239243 LCTP09848 1927 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 TADA3O75528 432 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 EPHX2P34913 555 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 GTF2BQ00403 316 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 HSP90AA2PQ14568 343 aaPredicted RBP25.46■■□□□ 1.67
MSX2-201ENST00000239243 HGSNATQ68CP4 663 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 ANO5Q75V66 913 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 SPATC1LQ9H0A9 340 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 C17orf75Q9HAS0 396 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 BTBD7Q9P203 1132 aa25.46■■□□□ 1.67
MSX2-201ENST00000239243 PCDHA13Q9Y5I0 950 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms