RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZNF341Q9BYN7 854 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 FAM198AQ9UFP1 575 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 MTRF1LQ9UGC7 380 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 HSPA1LP34931 641 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 GCLMP48507 274 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 SLC12A3P55017 1021 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 KCNA1Q09470 495 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 PPP1R7Q15435 360 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 RAB17Q9H0T7 212 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 FBXO28Q9NVF7 368 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 SERPINA10Q9UK55 444 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 SCAF8Q9UPN6 1271 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 PHLPP1O60346 1717 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 GRID2IPA4D2P6 1211 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 A6NNZ2 444 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 DLATP10515 647 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 SF3A3Q12874 501 aaKnown RBP eCLIP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 BIRC3Q13489 604 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 TUBB8Q3ZCM7 444 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 LDHDQ86WU2 507 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 CCDC105Q8IYK2 499 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 UHMK1Q8TAS1 419 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 HERC5Q9UII4 1024 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 PLAAQ9Y263 795 aa16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 NOC2LQ9Y3T9 749 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-201ENST00000222402 RAD51CO43502 376 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 GALCP54803 685 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 MTMR3Q13615 1198 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 CPLX4Q7Z7G2 160 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 AMACRQ9UHK6 382 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 EXOC7Q9UPT5 735 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 EML1O00423 815 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ENTPD3O75355 529 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 LIG3P49916 1009 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ZNF211Q13398 564 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 B4GALNT4Q76KP1 1039 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 INTS2Q9H0H0 1204 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 TUFT1Q9NNX1 390 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ZBTB39O15060 712 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 HIP1RO75146 1068 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 NR1D1P20393 614 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 PEX3P56589 373 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ZNF746Q6NUN9 644 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ACCSQ96QU6 501 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ATP8A1Q9Y2Q0 1164 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 ABCA3Q99758 1704 aa16.23■□□□□ 0.19
UBE2D4-201ENST00000222402 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 TRIM66O15016 1216 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 SART1O43290 800 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 GLI1P08151 1106 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 HARSP12081 509 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 INPP5BP32019 993 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 SOX5P35711 763 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 FMO5P49326 533 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 MXI1P50539 228 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 DHX9Q08211 1270 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 ARHGAP27Q6ZUM4 889 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 NLRX1Q86UT6 975 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 CCDC50Q8IVM0 306 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 IGKV6D-41A0A0C4DH26 115 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 SLC16A3O15427 465 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 PJA2O43164 708 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 CALCOCO2Q13137 446 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 ARSHQ5FYA8 562 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 ARHGEF16Q5VV41 709 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 DDX42Q86XP3 938 aaKnown RBP eCLIP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 MCF2L2Q86YR7 1114 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 GMCL1Q96IK5 515 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 ZIM3Q96PE6 472 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 POLR3CQ9BUI4 534 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 SEL1LQ9UBV2 794 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 ZBED4O75132 1171 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 CETN2P41208 172 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 MUM1L1Q5H9M0 696 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 USP38Q8NB14 1042 aa16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 TAF1DQ9H5J8 278 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-201ENST00000222402 SLC26A4O43511 780 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 TLR2O60603 784 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 HDLBPQ00341 1268 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 Q4G0T1 1027 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 KIFAP3Q92845 792 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 TMEM206Q9H813 350 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 AIPL1Q9NZN9 384 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 ATF5Q9Y2D1 282 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 DAAM1Q9Y4D1 1078 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 PLTPP55058 493 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 EPHA7Q15375 998 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 DACT2Q5SW24 774 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 PPM1EQ8WY54 764 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 MAGOHBQ96A72 148 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 IWS1Q96ST2 819 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 ZNF277Q9NRM2 450 aaPredicted RBP16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 CCDC188H7C350 402 aa16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 CLK2P49760 499 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-201ENST00000222402 MKL1Q969V6 931 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms