RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 BHMT2Q9H2M3 363 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 METTL14Q9HCE5 456 aaKnown RBP18.83■□□□□ 0.61
USB1-201ENST00000219281 PCDHB13Q9Y5F0 798 aa18.83■□□□□ 0.61
USB1-201ENST00000219281 FAM86B1E9PN63 330 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 DDX3XO00571 662 aaKnown RBP eCLIP18.83■□□□□ 0.62e-15■■■■■ 27.4
USB1-201ENST00000219281 FAM86B2P0C5J1 330 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 PPARDQ03181 441 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 USH1GQ495M9 461 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 Q4G0T1 1027 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 LRIG3Q6UXM1 1119 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 VPS36Q86VN1 386 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 LMBR1Q8WVP7 490 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 CCDC17Q96LX7 622 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 RUSC1Q9BVN2 902 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 PDGFDQ9GZP0 370 aaPredicted RBP18.83■□□□□ 0.6
USB1-201ENST00000219281 STXBP5LQ9Y2K9 1186 aa18.83■□□□□ 0.6
USB1-201ENST00000219281 TNS1Q9HBL0 1735 aaKnown RBP18.82■□□□□ 0.6
USB1-201ENST00000219281 SFI1A8K8P3 1242 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 GCOM1H8Y6P7 765 aaPredicted RBP18.82■□□□□ 0.6
USB1-201ENST00000219281 GFPT2O94808 682 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 MYZAPP0CAP1 466 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 RPL13P26373 211 aaKnown RBP18.82■□□□□ 0.6
USB1-201ENST00000219281 DAAM2Q86T65 1068 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 ZNF473Q8WTR7 871 aaKnown RBP18.82■□□□□ 0.6
USB1-201ENST00000219281 DCAF4Q8WV16 495 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 CNKSR1Q969H4 720 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 LRRC45Q96CN5 670 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 IDI2Q9BXS1 227 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 AMACRQ9UHK6 382 aa18.82■□□□□ 0.6
USB1-201ENST00000219281 H0YGN5 161 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 TBX3O15119 743 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 SLC16A3O15427 465 aaKnown RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 TBCAO75347 108 aaKnown RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 KIAA0754O94854 1291 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 TAL1P17542 331 aaPredicted RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 CTNNA1P35221 906 aaKnown RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 FLT3P36888 993 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 RBM5P52756 815 aaKnown RBP eCLIP18.81■□□□□ 0.6
USB1-201ENST00000219281 HDLBPQ00341 1268 aaKnown RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 SLFN11Q7Z7L1 901 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 IKZF4Q9H2S9 585 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 FBXL5Q9UKA1 691 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 NFS1Q9Y697 457 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 MYH4Q9Y623 1939 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 BHMG1C9JSJ3 638 aaPredicted RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 MSH4O15457 936 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 BMT2Q1RMZ1 405 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 FBXW10Q5XX13 1052 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 NLRP14Q86W24 1093 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 RASGEF1CQ8N431 466 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 OTUD6BQ8N6M0 293 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 CCT8L2Q96SF2 557 aa18.81■□□□□ 0.6
USB1-201ENST00000219281 SUCLA2Q9P2R7 463 aaPredicted RBP18.81■□□□□ 0.6
USB1-201ENST00000219281 A0A0A6YYK5 440 aaPredicted RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 SPDYE3A6NKU9 549 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 CCDC188H7C350 402 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 DAPK3O43293 454 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 ANXA13P27216 316 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 NT5DC3Q86UY8 548 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 MYCBPAPQ8TBZ2 947 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 UBLCP1Q8WVY7 318 aaPredicted RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 MKL1Q969V6 931 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 AMNQ9BXJ7 453 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 RGL1Q9NZL6 768 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 YDJCA8MPS7 323 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 MEFVO15553 781 aaPredicted RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 FERP16591 822 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 GALCP54803 685 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 ZNF844Q08AG5 666 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 CERKLQ49MI3 558 aaPredicted RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 MMS22LQ6ZRQ5 1243 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 SPATS2Q86XZ4 545 aaKnown RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 SIAH1Q8IUQ4 282 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 SYCE1Q8N0S2 351 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 CYP2W1Q8TAV3 490 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 LNX1Q8TBB1 728 aaPredicted RBP18.8■□□□□ 0.6
USB1-201ENST00000219281 FAM20AQ96MK3 541 aa18.8■□□□□ 0.6
USB1-201ENST00000219281 BCCIPQ9P287 314 aaKnown RBP eCLIP18.8■□□□□ 0.6
USB1-201ENST00000219281 E7EVH7 732 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 TTI1O43156 1089 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 TGFB1I1O43294 461 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 POLD1P28340 1107 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 STAT1P42224 750 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 EIF2AK1Q9BQI3 630 aaKnown RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 CELF4Q9BZC1 486 aaKnown RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 OSGEPQ9NPF4 335 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 NYAP2Q9P242 653 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 PI4KBQ9UBF8 816 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 SERPINA10Q9UK55 444 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 VAV3Q9UKW4 847 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 INTUQ9ULD6 942 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 RABGAP1Q9Y3P9 1069 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 ATXN2Q99700 1313 aaKnown RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 FAM170AA1A519 330 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 EML1O00423 815 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 EVI5O60447 810 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
USB1-201ENST00000219281 SREBF1P36956 1147 aa18.79■□□□□ 0.6
USB1-201ENST00000219281 GTF2A1P52655 376 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms