RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 NCANO14594 1321 aa24.1■■□□□ 1.45
HTATSF1-201ENST00000218364 H0YHG0 523 aa24.1■■□□□ 1.45
HTATSF1-201ENST00000218364 MEIS1O00470 390 aa24.1■■□□□ 1.45
HTATSF1-201ENST00000218364 DDR1Q08345 913 aa24.1■■□□□ 1.45
HTATSF1-201ENST00000218364 U2AF1L4Q8WU68 220 aaKnown RBP24.1■■□□□ 1.45
HTATSF1-201ENST00000218364 TTI1O43156 1089 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 STAT1P42224 750 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 GALCP54803 685 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 PRR16Q569H4 304 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 TCERG1LQ5VWI1 586 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 PLCD3Q8N3E9 789 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 LNX1Q8TBB1 728 aaPredicted RBP24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 P2RX7Q99572 595 aaKnown RBP24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 AMFRQ9UKV5 643 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 DIS3Q9Y2L1 958 aaKnown RBP24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 IFT88Q13099 833 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 FAM196AQ6ZSG2 479 aa24.09■■□□□ 1.45
HTATSF1-201ENST00000218364 C5orf60A6NFR6 353 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 MPHOSPH10O00566 681 aaKnown RBP24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 RNF187Q5TA31 235 aaPredicted RBP24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 GJB7Q6PEY0 223 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 MKL1Q969V6 931 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 CCDC17Q96LX7 622 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 FAM20AQ96MK3 541 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 USP40Q9NVE5 1235 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 UTP11Q9Y3A2 253 aaKnown RBP24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 TAF1LQ8IZX4 1826 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 QSER1Q2KHR3 1735 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 NFIL3Q16649 462 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 DCAF4Q8WV16 495 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 TXLNGYQ9BZA5 131 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 OLFML3Q9NRN5 406 aa24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 CNOT8Q9UFF9 292 aaKnown RBP24.08■■□□□ 1.45
HTATSF1-201ENST00000218364 BRWD3Q6RI45 1802 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 RSPH10B2B2RC85 870 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 F8VZ95 297 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 TMEM253P0C7T8 217 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 RSPH10BP0C881 870 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 PPATQ06203 517 aa24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 DDX20Q9UHI6 824 aaKnown RBP24.08■■□□□ 1.44
HTATSF1-201ENST00000218364 EP400Q96L91 3159 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 MNAT1P51948 309 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 SMTNP53814 917 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 KCTD17Q8N5Z5 321 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 SYT11Q9BT88 431 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 NOVA2Q9UNW9 492 aaKnown RBP24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 DDX3YO15523 660 aaKnown RBP24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 TGFB1I1O43294 461 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 EVI5O60447 810 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 PPFIA2O75334 1257 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 LMNB1P20700 586 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 SOX5P35711 763 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 RFFLQ8WZ73 363 aa24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 POLR3CQ9BUI4 534 aaPredicted RBP24.07■■□□□ 1.44
HTATSF1-201ENST00000218364 C6orf229H3BNL8 230 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 BUB1BO60566 1050 aaPredicted RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 HLA-DOAP06340 250 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 HOXA10P31260 410 aaPredicted RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 DHX9Q08211 1270 aaKnown RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 RUSC1Q9BVN2 902 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 CELF4Q9BZC1 486 aaKnown RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 ACTR5Q9H9F9 607 aaPredicted RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 LTBP1Q14766 1721 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 GCNT3O95395 438 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 EYA4O95677 639 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 GAP43P17677 238 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 TMOD1P28289 359 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 CIITAP33076 1130 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 SREBF1P36956 1147 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 PTENP60484 403 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 PPP2R5EQ16537 467 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 ARMC9Q7Z3E5 817 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 CCDC13Q8IYE1 715 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 CERS5Q8N5B7 392 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 ATP8B4Q8TF62 1192 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 STK33Q9BYT3 514 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 A1CFQ9NQ94 594 aaKnown RBP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 BCCIPQ9P287 314 aaKnown RBP eCLIP24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 VAV3Q9UKW4 847 aa24.06■■□□□ 1.44
HTATSF1-201ENST00000218364 FAM86B1E9PN63 330 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 CLIC2O15247 247 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 EIF3DO15371 548 aaKnown RBP eCLIP24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 TBCAO75347 108 aaKnown RBP24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 FGGP02679 453 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 FAM86B2P0C5J1 330 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 EIF3BP55884 814 aaKnown RBP24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 SLC15A2Q16348 729 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 SLC35G2Q8TBE7 412 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 COA1Q9GZY4 146 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 RAB17Q9H0T7 212 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 BHMT2Q9H2M3 363 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 PCDHB13Q9Y5F0 798 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 KCNA1Q09470 495 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 ODF2Q5BJF6 829 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 RAPGEF5Q92565 580 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 TLCD1Q96CP7 247 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 OSGEPQ9NPF4 335 aa24.05■■□□□ 1.44
HTATSF1-201ENST00000218364 F8W031 263 aaPredicted RBP24.04■■□□□ 1.44
HTATSF1-201ENST00000218364 RASSF9O75901 435 aa24.04■■□□□ 1.44
HTATSF1-201ENST00000218364 FOSP01100 380 aaPredicted RBP24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms