RNA–Protein interactions for RNA: ENST00000217244.7

CSNK2A1-201, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,416 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-201ENST00000217244 CCND2P30279 289 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 TRIM65Q6PJ69 517 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 MOB2Q70IA6 237 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 PLCB1Q9NQ66 1216 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 FAM184BQ9ULE4 1060 aa9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
CSNK2A1-201ENST00000217244 A0A087X0T9 212 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 IFNB1P01574 187 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 FAM228BP0C875 321 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 TCP1P17987 556 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 COPB2P35606 906 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 CETN2P41208 172 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 PIK3CAP42336 1068 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 DCUN1D2Q6PH85 259 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 IRF2BP1Q8IU81 584 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 CCDC170Q8IYT3 715 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 ZNF653Q96CK0 615 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 MTMR9Q96QG7 549 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 C1orf112Q9NSG2 853 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 ASIC3Q9UHC3 531 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 WDR64B1ANS9 1081 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 K7ERI5 159 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 VCAM1P19320 739 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 KLRC1P26715 233 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 GIT2Q14161 759 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 MCTP2Q6DN12 878 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 CC2D1AQ6P1N0 951 aaPredicted RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 PDXDC1Q6P996 788 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 ZNF280CQ8ND82 737 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 SLC30A5Q8TAD4 765 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 FAM49AQ9H0Q0 323 aaPredicted RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 DDX47Q9H0S4 455 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 NFU1Q9UMS0 254 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 MARF1Q9Y4F3 1742 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 FAM237AA0A1B0GTK4 181 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 A0A1W2PQC6 194 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 GOLGA6CA6NDK9 693 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 GOLGA8SH3BPF8 625 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 PGK2P07205 417 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 GOLGA6DP0CG33 693 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 UCHL3P15374 230 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 MPHOSPH6Q99547 160 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 CBWD1Q9BRT8 395 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 GOLGA6AQ9NYA3 693 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 CEP72Q9P209 647 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 ARHGAP20Q9P2F6 1191 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 DOT1LQ8TEK3 1739 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 ATF7P17544 494 aaPredicted RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 MAP3K9P80192 1104 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 PTK2Q05397 1052 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 SEL1L2Q5TEA6 688 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 NSUN6Q8TEA1 469 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
CSNK2A1-201ENST00000217244 BUB1BO60566 1050 aaPredicted RBP9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 CALCAP01258 141 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 SREBF1P36956 1147 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 IRX5P78411 483 aaPredicted RBP9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 CASP8Q14790 479 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 CENPPQ6IPU0 288 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 NT5C1BQ96P26 610 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 ACP6Q9NPH0 428 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 PCDHB4Q9Y5E5 795 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 LRP6O75581 1613 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 KIAA0754O94854 1291 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 HERVK_113P62684 666 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 EPHA7Q15375 998 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 IFT20Q8IY31 132 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 LRRC71Q8N4P6 559 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 KIFAP3Q92845 792 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 MXRA8Q9BRK3 442 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 EHD4Q9H223 541 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 AKT3Q9Y243 479 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 COL18A1P39060 1754 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 PDE6CP51160 858 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 HDLBPQ00341 1268 aaKnown RBP9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 BRD3Q15059 726 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 SEPT7Q16181 437 aaKnown RBP9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 CEP85LQ5SZL2 805 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 C15orf52Q6ZUT6 534 aaKnown RBP9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 DPP9Q86TI2 863 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 FAM76AQ8TAV0 307 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 OSBPL9Q96SU4 736 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 LRRC1Q9BTT6 524 aa9.33□□□□□ -0.92
CSNK2A1-201ENST00000217244 NUP98P52948 1817 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 RCCD1A6NED2 376 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 CYP26A1O43174 497 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 VAMP7P51809 220 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 SPDYE2Q495Y8 402 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 FAM47CQ5HY64 1035 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 KIAA1755Q5JYT7 1200 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 SYT2Q8N9I0 419 aaPredicted RBP9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 HAUS1Q96CS2 278 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 PNKPQ96T60 521 aa9.32□□□□□ -0.92
CSNK2A1-201ENST00000217244 WDR18Q9BV38 432 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms