RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 TUBB4BP68371 445 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 FIGNQ5HY92 759 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 LMBRD2Q68DH5 695 aaPredicted RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 IRF2BP2Q7Z5L9 587 aa16.42■□□□□ 0.22
EFNB1-201ENST00000204961 POP1Q99575 1024 aaKnown RBP16.42■□□□□ 0.22
EFNB1-201ENST00000204961 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 EIF3HO15372 352 aaKnown RBP eCLIP16.41■□□□□ 0.22
EFNB1-201ENST00000204961 ARP10275 920 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 MYCLP12524 364 aaPredicted RBP16.41■□□□□ 0.22
EFNB1-201ENST00000204961 TNFAIP3P21580 790 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 STAT1P42224 750 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 MEI1Q5TIA1 1274 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 PPP4R3AQ6IN85 833 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 THAP2Q9H0W7 228 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 GANQ9H2C0 597 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 UBE2TQ9NPD8 197 aaPredicted RBP16.41■□□□□ 0.22
EFNB1-201ENST00000204961 FZD1Q9UP38 647 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 HSD17B3P37058 310 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 CORO7P57737 925 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 MTM1Q13496 603 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 KIAA1755Q5JYT7 1200 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 SLC35G2Q8TBE7 412 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 KAT2BQ92831 832 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 VIPAS39Q9H9C1 493 aa16.41■□□□□ 0.22
EFNB1-201ENST00000204961 BMP3P12645 472 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 PSMD2Q13200 908 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 CTNNBL1Q8WYA6 563 aaPredicted RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 THOC1Q96FV9 657 aaKnown RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 WRAP73Q9P2S5 460 aaPredicted RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 FLOT1O75955 427 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 PPP1R2P41236 205 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SYDE2Q5VT97 1194 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 LLGL2Q6P1M3 1020 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SIAH1Q8IUQ4 282 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SLC30A5Q8TAD4 765 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 MAGOHBQ96A72 148 aaKnown RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 FAM198AQ9UFP1 575 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SSU72P8A0A1W2PR75 194 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 LSP1P33241 339 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 HP1BP3Q5SSJ5 553 aaPredicted RBP16.4■□□□□ 0.22
EFNB1-201ENST00000204961 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 EMBQ6PCB8 327 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 CAPN12Q6ZSI9 719 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 VPS36Q86VN1 386 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SLC35C1Q96A29 364 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 SAAL1Q96ER3 474 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
EFNB1-201ENST00000204961 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 ESYT2A0FGR8 921 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 FOXN3O00409 490 aaPredicted RBP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 HNRNPH3P31942 346 aaKnown RBP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 TADA2BQ86TJ2 420 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 GOLGA8KD6RF30 607 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 K7ENM7 598 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 CALUO43852 315 aaPredicted RBP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 MYZAPP0CAP1 466 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 EP400NLQ6ZTU2 488 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.39■□□□□ 0.21
EFNB1-201ENST00000204961 ERVK-5Q9HDB9 667 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 PRR12Q9ULL5 1215 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 ABCA3Q99758 1704 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 CCDC169A6NNP5 214 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 NF2P35240 595 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 VPS72Q15906 364 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 HS2ST1Q7LGA3 356 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 TPCN2Q8NHX9 752 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 WDR18Q9BV38 432 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 COA1Q9GZY4 146 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 TCEAL9Q9UHQ7 104 aa16.39■□□□□ 0.21
EFNB1-201ENST00000204961 ASTN1O14525 1302 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 PGRMC1O00264 195 aaKnown RBP16.38■□□□□ 0.21
EFNB1-201ENST00000204961 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
EFNB1-201ENST00000204961 LRRC14Q15048 493 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 LNX1Q8TBB1 728 aaPredicted RBP16.38■□□□□ 0.21
EFNB1-201ENST00000204961 KRT35Q92764 455 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 PI4KBQ9UBF8 816 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 GAKO14976 1311 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 GRIN2DO15399 1336 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 CDK17Q00537 523 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 MAP2K1Q02750 393 aaPredicted RBP16.38■□□□□ 0.21
EFNB1-201ENST00000204961 ACTN3Q08043 901 aaPredicted RBP16.38■□□□□ 0.21
EFNB1-201ENST00000204961 PROM2Q8N271 834 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 AGBL1Q96MI9 1066 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 AMFRQ9UKV5 643 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 CCDC88AQ3V6T2 1871 aa16.38■□□□□ 0.21
EFNB1-201ENST00000204961 ROBO3Q96MS0 1386 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 TGFB1I1O43294 461 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 SHBGP04278 402 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 DLATP10515 647 aaKnown RBP16.37■□□□□ 0.21
EFNB1-201ENST00000204961 FGFR4P22455 802 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 PIK3R5Q8WYR1 880 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 ZNF577Q9BSK1 485 aa16.37■□□□□ 0.21
EFNB1-201ENST00000204961 C21orf2O43822 256 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms