RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 CTNNBL1Q8WYA6 563 aaPredicted RBP21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 SPZ1Q9BXG8 430 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 SLIT2O94813 1529 aa21.78■■□□□ 1.08
PPP1R3F-201ENST00000055335 IGF2BP3O00425 579 aaKnown RBP eCLIP21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 LRRN2O75325 713 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 NUGGCQ68CJ6 796 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 C3orf20Q8ND61 904 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 PLCD4Q9BRC7 762 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 LZTS2Q9BRK4 669 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 ECT2Q9H8V3 914 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 PICALMQ13492 652 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 RDH13Q8NBN7 331 aa21.77■■□□□ 1.08
PPP1R3F-201ENST00000055335 SRRM3A6NNA2 597 aaPredicted RBP21.77■■□□□ 1.07
PPP1R3F-201ENST00000055335 ACSL3O95573 720 aa21.77■■□□□ 1.07
PPP1R3F-201ENST00000055335 CCNHP51946 323 aaPredicted RBP21.77■■□□□ 1.07
PPP1R3F-201ENST00000055335 SYCE1Q8N0S2 351 aa21.77■■□□□ 1.07
PPP1R3F-201ENST00000055335 ERP44Q9BS26 406 aa21.77■■□□□ 1.07
PPP1R3F-201ENST00000055335 TCP11X1B4DZS4 312 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L15C9J2P7 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L13C9JLJ4 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L11C9JVI0 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L18D6R9N7 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L22D6RA61 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L17D6RBQ6 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L19D6RCP7 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L20D6RJB6 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 KCNA1Q09470 495 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L24Q0WX57 530 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 USP17L6PQ6QN14 398 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 ZNF317Q96PQ6 595 aaPredicted RBP21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 BCORQ6W2J9 1755 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 CCDC189A1A4V9 331 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 AKAP3O75969 853 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 ALDH5A1P51649 535 aaPredicted RBP21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 EIF3BP55884 814 aaKnown RBP21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 LONRF1Q17RB8 773 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 SFR1Q86XK3 245 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 PAIP2Q9BPZ3 127 aaKnown RBP21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 STAT1P42224 750 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 KCNJ1P48048 391 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 ITPK1Q13572 414 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 JAMLQ86YT9 394 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 ATP8B4Q8TF62 1192 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 HAS1Q92839 578 aa21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 PABPC3Q9H361 631 aaKnown RBP21.76■■□□□ 1.07
PPP1R3F-201ENST00000055335 LOC102724428A0A0B4J2F2 783 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 EVI5O60447 810 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 GCNT3O95395 438 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 CREB1P16220 341 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 SIK1P57059 783 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 TTBK2Q6IQ55 1244 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 PNMA3Q9UL41 463 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 PAEPP09466 180 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 PSMC6P62333 389 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 KIF9Q9HAQ2 790 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 SUCLA2Q9P2R7 463 aaPredicted RBP21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 TBK1Q9UHD2 729 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 IGSF9BQ9UPX0 1349 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
PPP1R3F-201ENST00000055335 RASGRF2O14827 1237 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 PDIA5Q14554 519 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 KIAA1755Q5JYT7 1200 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 TLCD1Q96CP7 247 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 NSRP1Q9H0G5 558 aaKnown RBP21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 ZNF652Q9Y2D9 606 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 BZW2Q9Y6E2 419 aaKnown RBP21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 RSPH10B2B2RC85 870 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 RSPH10BP0C881 870 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 CYP11B2P19099 503 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 CCDC105Q8IYK2 499 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 KCTD10Q9H3F6 313 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 MYH1P12882 1939 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 MYH4Q9Y623 1939 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 UBR2Q8IWV8 1755 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 GHRP10912 638 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 TMEM119Q4V9L6 283 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 C10orf76Q5T2E6 689 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 DCAF12L1Q5VU92 463 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 TLDC1Q6P9B6 456 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 YIPF3Q9GZM5 350 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 TAS2R14Q9NYV8 317 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 C15orf41Q9Y2V0 281 aa21.74■■□□□ 1.07
PPP1R3F-201ENST00000055335 EDIL3O43854 480 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 PPFIA2O75334 1257 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 RFC4P35249 363 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 SLC17A8Q8NDX2 589 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 ATXN2LQ8WWM7 1075 aaKnown RBP21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 ARHGEF26Q96DR7 871 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 CTTNBP2NLQ9P2B4 639 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 PLS1Q14651 629 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 NOP53Q9NZM5 478 aaKnown RBP21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 TAF1P21675 1872 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 CASZ1Q86V15 1759 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 CLSTN1O94985 981 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 BARGINQ6ZT62 677 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 ERICH1Q86X53 443 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 P3H4Q92791 437 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 THAP2Q9H0W7 228 aa21.73■■□□□ 1.07
PPP1R3F-201ENST00000055335 TRPC6Q9Y210 931 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms