RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 MAGEB2O15479 319 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 GBP1P32455 592 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 GCLCP48506 637 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 AP3M2P53677 418 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 ERICH1Q86X53 443 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 TSC1Q92574 1164 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 NCAPGQ9BPX3 1015 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 DONSONQ9NYP3 566 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 DGAT1O75907 488 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 ATF2P15336 505 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 MUM1L1Q5H9M0 696 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 ATG4CQ96DT6 458 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 SLC26A4O43511 780 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 RGS2P41220 211 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 PPP2R5CQ13362 524 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 MXD4Q14582 209 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 PTPROQ16827 1216 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 CEP57Q86XR8 500 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 ANKRD13CQ8N6S4 541 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 CALCOCO1Q9P1Z2 691 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 AFG3L2Q9Y4W6 797 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 SCINQ9Y6U3 715 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 PASKQ96RG2 1323 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 IL1R1P14778 569 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 EHHADHQ08426 723 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 IER5Q5VY09 327 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 SMAP1Q8IYB5 467 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 VPS52Q8N1B4 723 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 ZKSCAN4Q969J2 545 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 DDX41Q9UJV9 622 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 KIAA0391O15091 583 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 TBXAS1P24557 533 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 HPDP32754 393 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 CCDC170Q8IYT3 715 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 SUCLA2Q9P2R7 463 aaPredicted RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 ANAPC5Q9UJX4 755 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 KRT1P04264 644 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 VIMP08670 466 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 C4orf50Q6ZRC1 276 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 RNF149Q8NC42 400 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 CCNYQ8ND76 341 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 ZNF560Q96MR9 790 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 PFDN4Q9NQP4 134 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 I3L4J1 428 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 VPS41P49754 854 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 NAALADL2Q58DX5 795 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 PHF20Q9BVI0 1012 aa11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 NOC2LQ9Y3T9 749 aaKnown RBP11.17□□□□□ -0.62
NIPAL3-201ENST00000003912 A0A087WWV3 80 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 HIP1RO75146 1068 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 CPT1AP50416 773 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 CCDC121Q6ZUS5 278 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 PPP2R3CQ969Q6 453 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 PGBD4Q96DM1 585 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 PXDNQ92626 1479 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 DPYSL4O14531 572 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 MCF2LO15068 1137 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 CAPN2P17655 700 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 NFKBIAP25963 317 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 SCN4BQ8IWT1 228 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 EFCAB13Q8IY85 973 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 GPC2Q8N158 579 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 KCTD6Q8NC69 237 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 CDKL2Q92772 493 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 EHD4Q9H223 541 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 JMJD4Q9H9V9 463 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 MAP3K20Q9NYL2 800 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 C1orf228Q6PIY5 440 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 HAUS6Q7Z4H7 955 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 RNF180Q86T96 592 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 GPD1LQ8N335 351 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 TMEM35BQ8NCS4 154 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 STXBP3O00186 592 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 VAMP7P51809 220 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 BACE1P56817 501 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 LCMT1Q9UIC8 334 aa11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 PIN4Q9Y237 131 aaKnown RBP11.16□□□□□ -0.62
NIPAL3-201ENST00000003912 A6NNZ2 444 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ALDH1A1P00352 501 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 PRKCBP05771 671 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 GUCY1A2P33402 732 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 RFC5P40937 340 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 GCLMP48507 274 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 LAMC2Q13753 1193 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 DGKDQ16760 1214 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 TUBB8Q3ZCM7 444 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 ZNF449Q6P9G9 518 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 DNAJC12Q9UKB3 198 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 AGO2Q9UKV8 859 aaKnown RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 NWD1Q149M9 1564 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 SGK1O00141 431 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 TRAPPC3O43617 180 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 DDNO94850 711 aaPredicted RBP11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 FGFR2P21802 821 aa11.15□□□□□ -0.62
NIPAL3-201ENST00000003912 KRT31Q15323 416 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms