RNA–Protein interactions for RNA: ENST00000002596.5

HS3ST1-201, Transcript of heparan sulfate-glucosamine 3-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS3ST1, Length 8,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST1-201ENST00000002596 PLS3P13797 630 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 AARSP49588 968 aaKnown RBP eCLIP13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 AP2B1P63010 937 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 KRT72Q14CN4 511 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 MTERF2Q49AM1 385 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 ASPRV1Q53RT3 343 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 ULK4Q96C45 1275 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 MAP3K1Q13233 1512 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 RAB14P61106 215 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 BBS2Q9BXC9 721 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 H0Y3Z8 333 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 HSPH1Q92598 858 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 ZNF496Q96IT1 587 aaPredicted RBP13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 DDHD2O94830 711 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 GPATCH4Q5T3I0 446 aaKnown RBP13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 RAB42Q8N4Z0 105 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 DSCC1Q9BVC3 393 aa13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 REXO4Q9GZR2 422 aaKnown RBP13.21□□□□□ -0.29
HS3ST1-201ENST00000002596 CDC40O60508 579 aaKnown RBP eCLIP13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 CALN1Q9BXU9 219 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 RNF103-CHMP3A0A140T963 221 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 TMEM191CA6NGB0 347 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 E5RI56 91 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 SHROOM1Q2M3G4 852 aaPredicted RBP13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 KRT74Q7RTS7 529 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 TSPYL6Q8N831 410 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 POMGNT2Q8NAT1 580 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 FAM161BQ96MY7 647 aa13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.3
HS3ST1-201ENST00000002596 KLRF2D3W0D1 207 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 DPYSL4O14531 572 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 TADA3O75528 432 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 NRG3P56975 720 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 C10orf53Q8N6V4 93 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 GINS4Q9BRT9 223 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 OSTNP61366 133 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 FTOQ9C0B1 505 aaKnown RBP eCLIP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 TTLL1O95922 423 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 TAC1P20366 129 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 MMS22LQ6ZRQ5 1243 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 RPF1Q9H9Y2 349 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PIDD1Q9HB75 910 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ESRRAP11474 423 aaPredicted RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 HDAC4P56524 1084 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 GJA10Q969M2 543 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 EGFL8Q99944 293 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ACTR5Q9H9F9 607 aaPredicted RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ZMYND8Q9ULU4 1186 aaPredicted RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PSMC2P35998 433 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PLTPP55058 493 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 TFAMQ00059 246 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PLD3Q8IV08 490 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 TUBB6Q9BUF5 446 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PRPSAP2O60256 369 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 MT-ND3P03897 115 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 KIAA1755Q5JYT7 1200 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 PKN3Q6P5Z2 889 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ANKRD13CQ8N6S4 541 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 L3MBTL3Q96JM7 780 aaPredicted RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 DBNDD2Q9BQY9 259 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ZC3H7BQ9UGR2 993 aaKnown RBP13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 ZMYM6O95789 1325 aa13.2□□□□□ -0.3
HS3ST1-201ENST00000002596 MTRF1O75570 445 aaKnown RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 PPEF1O14829 653 aaPredicted RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 PFKFB1P16118 471 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 SCNN1DP51172 638 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 CNGA2Q16280 664 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 SLC25A24Q6NUK1 477 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 IYDQ6PHW0 289 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 APPL2Q8NEU8 664 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 MTERF3Q96E29 417 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 ACCSQ96QU6 501 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 NDFIP2Q9NV92 336 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 RRP15Q9Y3B9 282 aaKnown RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 JRKLQ9Y4A0 524 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 EPN1Q9Y6I3 576 aaPredicted RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 MICAL3Q7RTP6 2002 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 HSPA4LO95757 839 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 FBXW10Q5XX13 1052 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 LUZP2Q86TE4 346 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 HEATR4Q86WZ0 1026 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 E7EWF7 191 aa13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
HS3ST1-201ENST00000002596 YIPF3Q9GZM5 350 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms