RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Gpd2Q64521 727 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Nek5Q7TSC3 627 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Btbd7Q8CFE5 1130 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Smco2Q9DA21 347 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Slc15a2Q9ES07 729 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Hebp1Q9R257 190 aa30.34■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Gimap9G3X987 291 aa30.33■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Ppil2Q9D787 521 aa30.33■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Smchd1Q6P5D8 2007 aaKnown RBP30.33■■■□□ 2.45
Ldb1-208ENSMUST00000185355 Cpb1B2RS76 415 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 GcP21614 476 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Lmnb2P21619 596 aaKnown RBP30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 IbspQ61711 324 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Ppp1r13bQ62415 1087 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Zbtb7bQ64321 544 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Pgrmc2Q80UU9 217 aaKnown RBP30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Fam111aQ9D2L9 613 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Cfap53Q9D439 514 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Tjp2Q9Z0U1 1167 aaKnown RBP30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Gna15P30678 374 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Ces1eQ64176 562 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Spata2Q8K004 515 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Erlin1Q91X78 346 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 VillQ91YD6 859 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Tlr2Q9QUN7 784 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Cbx8Q9QXV1 362 aa30.32■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Cd44P15379 778 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Irx2P81066 474 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Etv6P97360 485 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Nup58Q8R332 587 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Pls3Q99K51 630 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 PycardQ9EPB4 193 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Gm8298J3QPI0 401 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 ThbdP15306 577 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Mapk4Q6P5G0 583 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Camkk2Q8C078 588 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 IntS13Q8QZV7 732 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Arfgap2Q99K28 520 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 YwhabQ9CQV8 246 aaKnown RBP30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Gm11983V9GXS8 105 aa30.31■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Mmp20P57748 482 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 NyxP83503 476 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Gm5935Q497S0 212 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 MaeaQ4VC33 396 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 FdxrQ61578 494 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 KaznQ69ZS8 779 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Lrsam1Q80ZI6 727 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Rnf34Q99KR6 376 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 SerhlQ9EPB5 311 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Gfpt2Q9Z2Z9 682 aa30.3■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Eif3j1Q3UGC7 261 aaKnown RBP30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Shtn1Q8K2Q9 631 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 OtoaQ8K561 1137 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 DonsonQ9QXP4 560 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 H2afzP0C0S6 128 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Irf8P23611 424 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 H2afvQ3THW5 128 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 E2f8Q58FA4 860 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Ints8Q80V86 995 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Tmx2Q9D710 295 aaKnown RBP30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Prl2b1Q9DAZ2 228 aa30.29■■■□□ 2.44
Ldb1-208ENSMUST00000185355 TazI7HJS2 263 aa30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Ddx3xQ62167 662 aaKnown RBP30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Atg4cQ811C2 458 aa30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Matr3Q8K310 846 aaKnown RBP30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Drap1Q9D6N5 205 aa30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 AatfQ9JKX4 526 aaKnown RBP30.28■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Psmc5P62196 406 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 GmpsQ3THK7 693 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Oog3Q3UWY1 500 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Tlr5Q9JLF7 859 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Rgs17Q9QZB0 210 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 DohhA0A1Y7VJ29 135 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Cyth3O08967 399 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Rps6ka1P18653 724 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Polr2fP61219 127 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 SnrpfP62307 86 aaKnown RBP30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Evi5P97366 809 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Garem2Q6PAJ3 880 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Bri3bpQ8BXV2 253 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Rbp7Q9EPC5 134 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 EmcnQ9R0H2 261 aa30.27■■■□□ 2.44
Ldb1-208ENSMUST00000185355 Odf2A3KGV1 830 aaKnown RBP30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 1700018F24RikB2RW27 314 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Gm10110D3Z5M2 615 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Calb1P12658 261 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Gtf2bP62915 316 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Tgoln2Q62314 363 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Sdad1Q80UZ2 687 aaKnown RBP30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Slc9a9Q8BZ00 644 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 DnerQ8JZM4 737 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 EcsitQ9QZH6 435 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Pgap3A2A559 320 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 UgcgO88693 394 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Pik3r1P26450 724 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Tcf12Q61286 706 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Iws1Q8C1D8 766 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Med15Q924H2 789 aa30.26■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Gm45261A0A1B0GSP6 197 aa30.25■■■□□ 2.43
Ldb1-208ENSMUST00000185355 Sh3bp1P55194 680 aa30.25■■■□□ 2.43
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms