RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Atp8b5A3FIN4 1183 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gimd1E9PW74 217 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Heatr4E9Q357 955 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pitpnm1O35954 1243 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Stk10O55098 966 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Casp7P97864 303 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ccdc69Q3TCJ8 202 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Trpc6Q61143 930 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mtmr10Q7TPM9 771 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 3830417A13RikQ8BQJ2 303 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Caps2Q8BUG5 550 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Matr3Q8K310 846 aaKnown RBP9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Snw1Q9CSN1 536 aaKnown RBP9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 SprtnG3X912 497 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Bcat1P24288 386 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tnni3P48787 211 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Kiaa1468Q148V7 1216 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Esyt3Q5DTI8 891 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ptpn18Q61152 453 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cep135Q6P5D4 1140 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Olfr119Q7TRJ5 321 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 IqcgQ80W32 419 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Eif4bQ8BGD9 611 aaKnown RBP9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Lrrc41Q8K1C9 807 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fbxo18Q8K2I9 1042 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Git2Q9JLQ2 708 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Fkbp1bQ9Z2I2 108 aa9.23□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm45140A0A0N4SUM8 220 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tbkbp1A2A9T0 611 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Supt3B0QZW4 406 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 NcapgE9PWG6 1004 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 SlkO54988 1233 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ube2hP62257 183 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Asic1Q6NXK8 526 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Atp6v0d2Q80SY3 350 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ipo5Q8BKC5 1097 aaKnown RBP9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Csgalnact2Q8C1F4 542 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Ankrd49Q8VE42 238 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nrbp2Q91V36 499 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Hebp1Q9R257 190 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Sh3bgrQ9WUZ7 214 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Vnn1Q9Z0K8 512 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm7168A0AUV4 508 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Lmod3E9QA62 571 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 AurkbO70126 345 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Becn1O88597 448 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 FpgsP48760 587 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Irx2P81066 474 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 E2f8Q58FA4 860 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Pnma5Q5DTT8 618 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tgoln2Q62314 363 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 IqceQ6PCQ0 778 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Prpf31Q8CCF0 499 aaKnown RBP9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Adgrg2Q8CJ12 1009 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mtmr14Q8VEL2 648 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Q91WD4 421 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Smyd3Q9CWR2 428 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tbc1d15Q9CXF4 671 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cndp2Q9D1A2 475 aaKnown RBP9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Prl2c5Q9JLV9 222 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 NbnQ9R207 751 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Scnn1bQ9WU38 638 aa9.22□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gm4841E9QAA8 417 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 MsnP26041 577 aaKnown RBP9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 RenbpP82343 430 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 P4ha1Q60715 534 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 CtcfQ61164 736 aaKnown RBP9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Zcchc14Q8VIG0 956 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Csde1Q91W50 798 aaKnown RBP9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Emc2Q9CRD2 297 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Rsph3bQ9DA80 389 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tle2Q9WVB2 767 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Zfp984A2A7A2 547 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Mctp1E9PV86 951 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Art2aP17981 287 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 PpardP35396 440 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Tap2P36371 702 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Akr1b1P45376 316 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Rnpc3Q3UZ01 514 aaKnown RBP9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Nudt16Q6P3D0 195 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Acot5Q6Q2Z6 421 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Serpinb3dQ6UKZ0 387 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Hook1Q8BIL5 728 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Krt79Q8VED5 531 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Arhgef7Q9ES28 862 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Dusp10Q9ESS0 483 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Arl6ip4Q9JM93 229 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Dnajb7Q9QYI8 312 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Gyg1Q9R062 333 aa9.21□□□□□ -0.93
Trim39-205ENSMUST00000173369 Cdc27A2A6Q5 825 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Klhdc7aA2APT9 773 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Gm9992B2RWK3 458 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 2610008E11RikG3X964 669 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 P4hbP09103 509 aaKnown RBP9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 StimateQ3UF25 288 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Spout1Q3UHX9 385 aaKnown RBP9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Bcar1Q61140 874 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Unc93aQ710D3 458 aa9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Snd1Q78PY7 910 aaKnown RBP9.21□□□□□ -0.94
Trim39-205ENSMUST00000173369 Aldh5a1Q8BWF0 523 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms