RNA–Protein interactions for RNA: ENSMUST00000171158.7

Sdc1-205, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 2,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-205ENSMUST00000171158 Fbxo10Q7TQF2 950 aa17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Kcnv2Q8CFS6 562 aa17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 LgsnQ8CIX8 563 aa17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ddx47Q9CWX9 455 aaKnown RBP17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Grtp1Q9D3N8 359 aa17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Rexo2Q9D8S4 237 aa17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Smchd1Q6P5D8 2007 aaKnown RBP17.02■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Fyb2A2A995 729 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Frmd8Q3UFK8 466 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Brd9Q3UQU0 596 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ccdc84Q4VA36 332 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Specc1Q5SXY1 1067 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Adcy2Q80TL1 1090 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Arhgef25Q9CWR0 618 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Drap1Q9D6N5 205 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 SetQ9EQU5 289 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Nup50Q9JIH2 466 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cntnap2Q9CPW0 1332 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Magea4F2Z493 315 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Got1P05201 413 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Phactr1Q2M3X8 580 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tax1bp1Q3UKC1 814 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 E2f5Q61502 335 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Sycp1Q62209 993 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Msantd2Q6NZR2 559 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Fnbp1Q80TY0 616 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 AopepQ8BXQ6 817 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tdrd3Q91W18 743 aaKnown RBP17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Med24Q99K74 987 aa17.01■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Atrnl1Q6A051 1378 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gm45261A0A1B0GSP6 197 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Trim30cD3YVI9 513 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Dnajb6O54946 365 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 DtnbO70585 659 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 GcP21614 476 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Usp4P35123 962 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ap1m1P35585 423 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Pbxip1Q3TVI8 727 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 TbataQ7TSD4 393 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ccdc181Q80ZU5 509 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Pdzph1Q8BGR1 1238 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Fbxo28Q8BIG4 368 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Btbd7Q8CFE5 1130 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Bud13Q8R149 637 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Osbpl1aQ91XL9 950 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Rasgef1cQ9D300 466 aa17■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Clrn2B2RVW2 232 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 ChkbO55229 394 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gdpd4Q3TT99 632 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Vwa3aQ3UVV9 1148 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ppp2r5aQ6PD03 486 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tmem132dQ76HP3 1097 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Scfd2Q8BTY8 684 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ctage5Q8R311 779 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Capn9Q9D805 690 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cacna1fQ9JIS7 1985 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Osbpl9A2A8Z1 736 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Zfp213E9QAW0 468 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gimap9G3X987 291 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Parp2O88554 559 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Klra1P20937 262 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Klra5Q60652 266 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Btnl9Q8BJE2 536 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tut1Q8R3F9 869 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Uchl3Q9JKB1 230 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ankrd2Q9WV06 328 aa16.99■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Hspa9P38647 679 aaKnown RBP16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Opa1P58281 960 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cep126Q0VBV7 1103 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tmprss11aQ3UQ41 389 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Git1Q68FF6 770 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Rnaseh2bQ80ZV0 308 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 DcakdQ8BHC4 231 aaKnown RBP16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Reep2Q8VCD6 254 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gpsm2Q8VDU0 679 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cpsf2O35218 782 aaKnown RBP16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 MyocO70624 490 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tagap1P0CAX8 505 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Ranbp1P34022 203 aaKnown RBP16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Rit2P70425 217 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Mier3Q3UHF3 551 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Znf652Q5DU09 608 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Fgfr1opQ66JX5 399 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Anks6Q6GQX6 883 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Lgi2Q8K4Z0 550 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 IvdQ9JHI5 424 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Hebp1Q9R257 190 aa16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Pacsin2Q9WVE8 486 aaKnown RBP16.98■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gm45194A0A140LJG2 572 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Prss51A0A286YDY8 319 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Gm10110D3Z5M2 615 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Sclt1G5E861 688 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cyth3O08967 399 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Mucl2P02815 138 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Cyp11b2P15539 500 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Hoxc13P50207 328 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Acot6Q32Q92 419 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Sorbs1Q62417 1290 aa16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Tfe3Q64092 572 aaKnown RBP16.97■□□□□ 0.31
Sdc1-205ENSMUST00000171158 Raver2Q7TPD6 673 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms